RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 TMEM225Q6GV28 225 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 C5orf46Q6UWT4 87 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 ZNF704Q6ZNC4 412 aaPredicted RBP11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 TMEM99Q8N816 258 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 LSMEM1Q8N8F7 131 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 SMYD1Q8NB12 490 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 PCYOX1LQ8NBM8 494 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 OR10A6Q8NH74 314 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 SLC26A7Q8TE54 656 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 DNAJA4Q8WW22 397 aaPredicted RBP11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 MUCL1Q96DR8 90 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 CCL19Q99731 98 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 SH3GL1Q99961 368 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 SF3B5Q9BWJ5 86 aaKnown RBP11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 ESRP2Q9H6T0 727 aaKnown RBP11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 KAT8Q9H7Z6 458 aaKnown RBP11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 C12orf10Q9HB07 376 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 TMEM27Q9HBJ8 222 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 SAR1AQ9NR31 198 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 KLHL14Q9P2G3 628 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 UPB1Q9UBR1 384 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 MALT1Q9UDY8 824 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 FLVCR1Q9Y5Y0 555 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 ITPR3Q14573 2671 aa11.25□□□□□ -0.61
HMGN1P4-201ENST00000419500 FBP2O00757 339 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 NPIPB7O75200 414 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 RAD51DO75771 328 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 MFN2O95140 757 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 HTR2AP28223 471 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 PCGF2P35227 344 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 MDH1P40925 334 aaKnown RBP11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 PCBP3P57721 371 aaKnown RBP11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 PPA1Q15181 289 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 ACKR1Q16570 336 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 TIMM23BQ5SRD1 257 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 FAM91A1Q658Y4 838 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 ULK3Q6PHR2 472 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 C6orf89Q6UWU4 347 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 C20orf204Q6ZNR8 217 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 SSX8Q7RTT4 187 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 NET1Q7Z628 596 aaPredicted RBP11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 PATL1Q86TB9 770 aaKnown RBP11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 COMTD1Q86VU5 262 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 SNX32Q86XE0 403 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 OR9K2Q8NGE7 335 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 MFSD8Q8NHS3 518 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 SLC38A4Q969I6 547 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 PIGTQ969N2 578 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 SLC25A36Q96CQ1 311 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 LRRC58Q96CX6 371 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 SLC47A1Q96FL8 570 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 ECSITQ9BQ95 431 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 PIF1Q9H611 641 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 BEX4Q9NWD9 120 aaPredicted RBP11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 TAS2R16Q9NYV7 291 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 CAPN7Q9Y6W3 813 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 TEP1Q99973 2627 aaKnown RBP11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 AKAP6Q13023 2319 aa11.24□□□□□ -0.61
HMGN1P4-201ENST00000419500 ABCA4P78363 2273 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 VPS13CQ709C8 3753 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 OR5H1A6NKK0 313 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 CLOCKO15516 846 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 ATP8B1O43520 1251 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 OR2T1O43869 369 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 KRT33AO76009 404 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 VAMP5O95183 116 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 NPPAP01160 153 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 CD3EP07766 207 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 LOXP28300 417 aaPredicted RBP11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 HOXC12P31275 282 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 DMTNQ08495 405 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 VMACQ2NL98 169 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 RABL3Q5HYI8 236 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 FAM69AQ5T7M9 428 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 NANOGP8Q6NSW7 305 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 AAED1Q7RTV5 226 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 P2RY8Q86VZ1 359 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 ZNF433Q8N7K0 673 aaPredicted RBP11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 ZNF454Q8N9F8 522 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 OR8J3Q8NGG0 315 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 RASSF5Q8WWW0 418 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 TMEM45BQ96B21 275 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 KTI12Q96EK9 354 aaPredicted RBP11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 RSPO3Q9BXY4 272 aaPredicted RBP11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 NANOGQ9H9S0 305 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 GID8Q9NWU2 228 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 RASD1Q9Y272 281 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 RNF115Q9Y4L5 304 aa11.23□□□□□ -0.61
HMGN1P4-201ENST00000419500 TRAV36DV7A0A075B6V5 113 aa11.22□□□□□ -0.61
HMGN1P4-201ENST00000419500 LOC100653049A0A140TA62 436 aa11.22□□□□□ -0.61
HMGN1P4-201ENST00000419500 M0QX08 132 aa11.22□□□□□ -0.61
HMGN1P4-201ENST00000419500 M0R3H8 397 aa11.22□□□□□ -0.61
HMGN1P4-201ENST00000419500 FXYD1O00168 92 aa11.22□□□□□ -0.61
HMGN1P4-201ENST00000419500 SLC22A2O15244 555 aa11.22□□□□□ -0.61
HMGN1P4-201ENST00000419500 SMPD2O60906 423 aa11.22□□□□□ -0.61
HMGN1P4-201ENST00000419500 KRT34O76011 436 aa11.22□□□□□ -0.61
HMGN1P4-201ENST00000419500 F8P00451 2351 aa11.22□□□□□ -0.61
HMGN1P4-201ENST00000419500 C8BP07358 591 aa11.22□□□□□ -0.61
HMGN1P4-201ENST00000419500 NTF4P34130 210 aa11.22□□□□□ -0.61
HMGN1P4-201ENST00000419500 IL1RL1Q01638 556 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms