RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 MKLN1Q9UL63 735 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 ZDHHC8Q9ULC8 765 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 CARD8Q9Y2G2 431 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 L3MBTL1Q9Y468 752 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF175Q9Y473 711 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 WDR45Q9Y484 360 aa6.2□□□□□ -1.42
HMGN1-205ENST00000419378 CCDC168Q8NDH2 2452 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 CELSR1Q9NYQ6 3014 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 HRNRQ86YZ3 2850 aaPredicted RBP6.19□□□□□ -1.42
HMGN1-205ENST00000419378 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 KRTAP4-8A0A0G2JLE6 195 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 A0A1W2PNV4 684 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 FAM234BA2RU67 622 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 GTPBP1O00178 669 aaKnown RBP6.19□□□□□ -1.42
HMGN1-205ENST00000419378 SYT5O00445 386 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF264O43296 627 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 EIF4E2O60573 245 aaKnown RBP6.19□□□□□ -1.42
HMGN1-205ENST00000419378 UGT2B17O75795 530 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 TNFSF13O75888 250 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 H6PDO95479 791 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 NUDT14O95848 222 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 GUSBP08236 651 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 FCGR2AP12318 317 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 ME2P23368 584 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 ELK4P28324 431 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 KCNJ5P48544 419 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 MRPL19P49406 292 aaKnown RBP6.19□□□□□ -1.42
HMGN1-205ENST00000419378 ANXA11P50995 505 aaKnown RBP6.19□□□□□ -1.42
HMGN1-205ENST00000419378 CCR4P51679 360 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 CHN2P52757 468 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 MVDP53602 400 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 RPS3AP61247 264 aaKnown RBP6.19□□□□□ -1.42
HMGN1-205ENST00000419378 STX1BP61266 288 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 TLE4Q04727 773 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 MYBPHQ13203 477 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 SNTB1Q13884 538 aaKnown RBP6.19□□□□□ -1.42
HMGN1-205ENST00000419378 QPRTQ15274 297 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 TOMM34Q15785 309 aaPredicted RBP6.19□□□□□ -1.42
HMGN1-205ENST00000419378 MAPK14Q16539 360 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 GTDC1Q4AE62 458 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 GPAT3Q53EU6 434 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 AP1ARQ63HQ0 302 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 OR2A2Q6IF42 318 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 FRRS1Q6ZNA5 592 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 HMGN2P46Q86SG4 172 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF619Q8N2I2 560 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 FITM2Q8N6M3 262 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 ANKFN1Q8N957 763 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 FAM71CQ8NEG0 241 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 TOR1AIP2Q8NFQ8 470 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 OR10D3Q8NH80 312 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 RFWD2Q8NHY2 731 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 TBC1D15Q8TC07 691 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 Q8TCH9 128 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 ZFP90Q8TF47 636 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 XAGE5Q8WWM1 108 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 OIT3Q8WWZ8 545 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 VPS33AQ96AX1 596 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF524Q96C55 264 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 ARSGQ96EG1 525 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 LRRC46Q96FV0 321 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 ITCHQ96J02 903 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 ADGRG7Q96K78 797 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 LURAP1Q96LR2 239 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 MAGEB18Q96M61 343 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 TRNT1Q96Q11 434 aaKnown RBP6.19□□□□□ -1.42
HMGN1-205ENST00000419378 ELAC2Q9BQ52 826 aaKnown RBP6.19□□□□□ -1.42
HMGN1-205ENST00000419378 CCDC28BQ9BUN5 200 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 PIGMQ9H3S5 423 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 TMEM185BQ9H7F4 350 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 RMND5AQ9H871 391 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 RNF122Q9H9V4 155 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 POLE3Q9NRF9 147 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.19□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF446Q9NWS9 450 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 KCNN3Q9UGI6 736 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 PACSIN3Q9UKS6 424 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 CORO2BQ9UQ03 480 aa6.19□□□□□ -1.42
HMGN1-205ENST00000419378 ANKRD17O75179 2603 aaKnown RBP6.19□□□□□ -1.42
HMGN1-205ENST00000419378 A0A0J9YW62 118 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 ZNF785A8K8V0 405 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 NR5A2O00482 541 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 TNFSF11O14788 317 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 ADAMDEC1O15204 470 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 EFNA2O43921 213 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 CXCL13O43927 109 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 BCAS1O75363 584 aaPredicted RBP6.18□□□□□ -1.42
HMGN1-205ENST00000419378 AQP8O94778 261 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 PRSS23O95084 383 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 ANP32DO95626 131 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 NTN1O95631 604 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 KRT75O95678 551 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 CSTAP01040 98 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 OPN1LWP04000 364 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 CRHP06850 196 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 CHRM4P08173 479 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 UBTFL6P0CB48 400 aaPredicted RBP6.18□□□□□ -1.42
HMGN1-205ENST00000419378 ZCCHC18P0CG32 403 aa6.18□□□□□ -1.42
HMGN1-205ENST00000419378 HOXB9P17482 250 aaPredicted RBP6.18□□□□□ -1.42
HMGN1-205ENST00000419378 SHC1P29353 583 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms