RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 GTF2IRD2BQ6EKJ0 949 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 GTF2IRD2Q86UP8 949 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 IPCEF1Q8WWN9 437 aaPredicted RBP18.79■□□□□ 0.6
CASC3-203ENST00000418132 GNRHR2Q96P88 292 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 UTP23Q9BRU9 249 aaKnown RBP18.79■□□□□ 0.6
CASC3-203ENST00000418132 CCDC90BQ9GZT6 254 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 CLCA1A8K7I4 914 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 H3BMQ9 156 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 NEURL1O76050 574 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 MT-ATP6P00846 226 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 EIF1P41567 113 aaKnown RBP18.79■□□□□ 0.6
CASC3-203ENST00000418132 PRPS1P60891 318 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 DYNC1I2Q13409 638 aaKnown RBP18.79■□□□□ 0.6
CASC3-203ENST00000418132 SYT14P1Q58G82 188 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 OR6S1Q8NH40 331 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 ZBTB8AQ96BR9 441 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 LRR1Q96L50 414 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 COG8Q96MW5 612 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 OR11A1Q9GZK7 315 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 AMBNQ9NP70 447 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 CCNB1IP1Q9NPC3 277 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 TIMMDC1Q9NPL8 285 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 FKBP14Q9NWM8 211 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 DNAJC27Q9NZQ0 273 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 ERVK-18Q9QC07 812 aa18.79■□□□□ 0.6
CASC3-203ENST00000418132 AKAP13Q12802 2813 aa18.78■□□□□ 0.6
CASC3-203ENST00000418132 SHISA8B8ZZ34 492 aa18.78■□□□□ 0.6
CASC3-203ENST00000418132 EFNA2O43921 213 aa18.78■□□□□ 0.6
CASC3-203ENST00000418132 CBR3O75828 277 aa18.78■□□□□ 0.6
CASC3-203ENST00000418132 ATE1O95260 518 aa18.78■□□□□ 0.6
CASC3-203ENST00000418132 PCMT1P22061 227 aa18.78■□□□□ 0.6
CASC3-203ENST00000418132 UQCRC1P31930 480 aa18.78■□□□□ 0.6
CASC3-203ENST00000418132 DNASE1L1P49184 302 aa18.78■□□□□ 0.6
CASC3-203ENST00000418132 DSCR4P56555 118 aaPredicted RBP18.78■□□□□ 0.6
CASC3-203ENST00000418132 FOXK2Q01167 660 aa18.78■□□□□ 0.6
CASC3-203ENST00000418132 PLEKHA8Q96JA3 519 aa18.78■□□□□ 0.6
CASC3-203ENST00000418132 SIGLEC11Q96RL6 698 aa18.78■□□□□ 0.6
CASC3-203ENST00000418132 GPX7Q96SL4 187 aaPredicted RBP18.78■□□□□ 0.6
CASC3-203ENST00000418132 CNTRLQ7Z7A1 2325 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 A0A0G2JMM0 328 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 A0A1W2PPB8 328 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 A0A1W2PRS3 328 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 KIR3DP1A8MWS1 328 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 MCIDASD6RGH6 385 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 OR2T1O43869 369 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 MRPS14O60783 128 aaKnown RBP18.77■□□□□ 0.6
CASC3-203ENST00000418132 AHSA1O95433 338 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 WDPCPO95876 746 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 F10P00742 488 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 PEPDP12955 493 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 DPP4P27487 766 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 MLLT10P55197 1068 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 SPINK14Q6IE38 97 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 LINC00696Q6ZRV3 163 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 GGHQ92820 318 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 CMC2Q9NRP2 79 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 DEPPQ9NTK1 212 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 WASF3Q9UPY6 502 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 GPR52Q9Y2T5 361 aa18.77■□□□□ 0.6
CASC3-203ENST00000418132 ZNF891A8MT65 544 aaPredicted RBP18.77■□□□□ 0.59
CASC3-203ENST00000418132 PPP1R3DO95685 299 aa18.77■□□□□ 0.59
CASC3-203ENST00000418132 CNR1P21554 472 aa18.77■□□□□ 0.59
CASC3-203ENST00000418132 SLC15A1P46059 708 aa18.77■□□□□ 0.59
CASC3-203ENST00000418132 EMX1Q04741 257 aaPredicted RBP18.77■□□□□ 0.59
CASC3-203ENST00000418132 CDC20Q12834 499 aa18.77■□□□□ 0.59
CASC3-203ENST00000418132 GXYLT1Q4G148 440 aa18.77■□□□□ 0.59
CASC3-203ENST00000418132 AGAP7PQ5VUJ5 663 aa18.77■□□□□ 0.59
CASC3-203ENST00000418132 DPY19L2P2Q6ZN68 376 aa18.77■□□□□ 0.59
CASC3-203ENST00000418132 AHSA2Q719I0 299 aa18.77■□□□□ 0.59
CASC3-203ENST00000418132 MAMDC2Q7Z304 686 aaPredicted RBP18.77■□□□□ 0.59
CASC3-203ENST00000418132 BCDIN3DQ7Z5W3 292 aaKnown RBP18.77■□□□□ 0.59
CASC3-203ENST00000418132 DDIT4LQ96D03 193 aa18.77■□□□□ 0.59
CASC3-203ENST00000418132 JSRP1Q96MG2 331 aaPredicted RBP18.77■□□□□ 0.59
CASC3-203ENST00000418132 ZNF582Q96NG8 517 aaPredicted RBP18.77■□□□□ 0.59
CASC3-203ENST00000418132 AGAP4Q96P64 663 aa18.77■□□□□ 0.59
CASC3-203ENST00000418132 SIGLEC12Q96PQ1 595 aa18.77■□□□□ 0.59
CASC3-203ENST00000418132 POTEKPQ9BYX7 375 aa18.77■□□□□ 0.59
CASC3-203ENST00000418132 NRIP3Q9NQ35 241 aa18.77■□□□□ 0.59
CASC3-203ENST00000418132 SERINC1Q9NRX5 453 aa18.77■□□□□ 0.59
CASC3-203ENST00000418132 POLHQ9Y253 713 aa18.77■□□□□ 0.59
CASC3-203ENST00000418132 SPTBN2O15020 2390 aa18.76■□□□□ 0.59
CASC3-203ENST00000418132 KDM4EB2RXH2 506 aaPredicted RBP18.76■□□□□ 0.59
CASC3-203ENST00000418132 BLOC1S5-TXNDC5H3BN57 136 aa18.76■□□□□ 0.59
CASC3-203ENST00000418132 SLC2A10O95528 541 aa18.76■□□□□ 0.59
CASC3-203ENST00000418132 HIST1H2ABP04908 130 aa18.76■□□□□ 0.59
CASC3-203ENST00000418132 IL11P20809 199 aa18.76■□□□□ 0.59
CASC3-203ENST00000418132 FOXK1P85037 733 aa18.76■□□□□ 0.59
CASC3-203ENST00000418132 ZNF362Q5T0B9 420 aaPredicted RBP18.76■□□□□ 0.59
CASC3-203ENST00000418132 HIST3H2AQ7L7L0 130 aa18.76■□□□□ 0.59
CASC3-203ENST00000418132 NANOGNBQ7Z5D8 188 aa18.76■□□□□ 0.59
CASC3-203ENST00000418132 GTPBP8Q8N3Z3 284 aaPredicted RBP18.76■□□□□ 0.59
CASC3-203ENST00000418132 LRRC75AQ8NAA5 344 aa18.76■□□□□ 0.59
CASC3-203ENST00000418132 MOSPD2Q8NHP6 518 aa18.76■□□□□ 0.59
CASC3-203ENST00000418132 HIST1H2ACQ93077 130 aa18.76■□□□□ 0.59
CASC3-203ENST00000418132 MUL1Q969V5 352 aa18.76■□□□□ 0.59
CASC3-203ENST00000418132 COPS4Q9BT78 406 aa18.76■□□□□ 0.59
CASC3-203ENST00000418132 FN3KQ9H479 309 aa18.76■□□□□ 0.59
CASC3-203ENST00000418132 GPR83Q9NYM4 423 aa18.76■□□□□ 0.59
CASC3-203ENST00000418132 CNOT2Q9NZN8 540 aaKnown RBP18.76■□□□□ 0.59
CASC3-203ENST00000418132 PCDHGB1Q9Y5G3 927 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms