RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 ZNF433Q8N7K0 673 aaPredicted RBP13.53□□□□□ -0.24
NUP50-204ENST00000417702 OR52E4Q8NGH9 312 aa13.53□□□□□ -0.24
NUP50-204ENST00000417702 DNAJA4Q8WW22 397 aaPredicted RBP13.53□□□□□ -0.24
NUP50-204ENST00000417702 TMEM204Q9BSN7 226 aa13.53□□□□□ -0.24
NUP50-204ENST00000417702 TMUB1Q9BVT8 246 aa13.53□□□□□ -0.24
NUP50-204ENST00000417702 TRIM2Q9C040 744 aa13.53□□□□□ -0.24
NUP50-204ENST00000417702 PIF1Q9H611 641 aa13.53□□□□□ -0.24
NUP50-204ENST00000417702 SELENONQ9NZV5 590 aa13.53□□□□□ -0.24
NUP50-204ENST00000417702 UPB1Q9UBR1 384 aa13.53□□□□□ -0.24
NUP50-204ENST00000417702 RNF115Q9Y4L5 304 aa13.53□□□□□ -0.24
NUP50-204ENST00000417702 AKAP9Q99996 3911 aa13.53□□□□□ -0.24
NUP50-204ENST00000417702 C2CD3Q4AC94 2353 aa13.52□□□□□ -0.24
NUP50-204ENST00000417702 AQP7P3A6NL99 342 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 TMEM229AB2RXF0 380 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 HS3ST1O14792 307 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 CLOCKO15516 846 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 TPST1O60507 370 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 NPIPB7O75200 414 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 VAMP5O95183 116 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 PLAUP00749 431 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 GTF2E2P29084 291 aaKnown RBP13.52□□□□□ -0.25
NUP50-204ENST00000417702 NTF4P34130 210 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 RGS8P57771 180 aaPredicted RBP13.52□□□□□ -0.25
NUP50-204ENST00000417702 MTPNP58546 118 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 NKX6-1P78426 367 aaPredicted RBP13.52□□□□□ -0.25
NUP50-204ENST00000417702 FAPQ12884 760 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 NCMAPQ5T1S8 102 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 SHEQ5VZ18 495 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 GPAT4Q86UL3 456 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 LSRQ86X29 649 aaPredicted RBP13.52□□□□□ -0.25
NUP50-204ENST00000417702 LRRC75A-AS1Q8N1F1 130 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 LSMEM1Q8N8F7 131 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 OR9K2Q8NGE7 335 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 MFSD8Q8NHS3 518 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 TMEM45BQ96B21 275 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 NSRP1Q9H0G5 558 aaKnown RBP13.52□□□□□ -0.25
NUP50-204ENST00000417702 EVA1AQ9H8M9 152 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 C12orf10Q9HB07 376 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 TMEM27Q9HBJ8 222 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 TAS2R16Q9NYV7 291 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 MALT1Q9UDY8 824 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 TESQ9UGI8 421 aaKnown RBP13.52□□□□□ -0.25
NUP50-204ENST00000417702 USF3Q68DE3 2245 aa13.52□□□□□ -0.25
NUP50-204ENST00000417702 A0A1B0GWA3 101 aa13.51□□□□□ -0.25
NUP50-204ENST00000417702 OR5H1A6NKK0 313 aa13.51□□□□□ -0.25
NUP50-204ENST00000417702 RAD51DO75771 328 aa13.51□□□□□ -0.25
NUP50-204ENST00000417702 PNMTP11086 282 aa13.51□□□□□ -0.25
NUP50-204ENST00000417702 HOXC12P31275 282 aa13.51□□□□□ -0.25
NUP50-204ENST00000417702 GYS2P54840 703 aa13.51□□□□□ -0.25
NUP50-204ENST00000417702 GNGT1P63211 74 aa13.51□□□□□ -0.25
NUP50-204ENST00000417702 FOXD4Q12950 439 aaPredicted RBP13.51□□□□□ -0.25
NUP50-204ENST00000417702 CYLC2Q14093 348 aaPredicted RBP13.51□□□□□ -0.25
NUP50-204ENST00000417702 OR7E24Q6IFN5 339 aa13.51□□□□□ -0.25
NUP50-204ENST00000417702 C5orf46Q6UWT4 87 aa13.51□□□□□ -0.25
NUP50-204ENST00000417702 C6orf89Q6UWU4 347 aa13.51□□□□□ -0.25
NUP50-204ENST00000417702 AAED1Q7RTV5 226 aa13.51□□□□□ -0.25
NUP50-204ENST00000417702 SLC30A8Q8IWU4 369 aa13.51□□□□□ -0.25
NUP50-204ENST00000417702 ZNF611Q8N823 705 aa13.51□□□□□ -0.25
NUP50-204ENST00000417702 RNF217Q8TC41 542 aa13.51□□□□□ -0.25
NUP50-204ENST00000417702 AKAP1Q92667 903 aaKnown RBP eCLIP13.51□□□□□ -0.25
NUP50-204ENST00000417702 SLC25A36Q96CQ1 311 aa13.51□□□□□ -0.25
NUP50-204ENST00000417702 RASD1Q9Y272 281 aa13.51□□□□□ -0.25
NUP50-204ENST00000417702 GMNCA6NCL1 334 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 OR2T1O43869 369 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 MFN2O95140 757 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 HTR2AP28223 471 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 LSP1P33241 339 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 RPS5P46782 204 aaKnown RBP13.5□□□□□ -0.25
NUP50-204ENST00000417702 TGFBR3Q03167 851 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 DMTNQ08495 405 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 SELPLGQ14242 412 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 MAPRE2Q15555 327 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 TRMT5Q32P41 509 aaKnown RBP13.5□□□□□ -0.25
NUP50-204ENST00000417702 MMEL1Q495T6 779 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 GLIPR1L2Q4G1C9 344 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 ALG10BQ5I7T1 473 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 FAM91A1Q658Y4 838 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 ADAM5Q6NVV9 412 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 ULK3Q6PHR2 472 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 COMTD1Q86VU5 262 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 RANBP3LQ86VV4 465 aaPredicted RBP13.5□□□□□ -0.25
NUP50-204ENST00000417702 PTOV1Q86YD1 416 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 POMGNT2Q8NAT1 580 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 WFDC11Q8NEX6 87 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 OR10A6Q8NH74 314 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 TMEM171Q8WVE6 324 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 C10orf82Q8WW14 230 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 SLC38A4Q969I6 547 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 SLC47A1Q96FL8 570 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 SH3GL1Q99961 368 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 RSPO3Q9BXY4 272 aaPredicted RBP13.5□□□□□ -0.25
NUP50-204ENST00000417702 CXorf56Q9H5V9 222 aa13.5□□□□□ -0.25
NUP50-204ENST00000417702 KAT8Q9H7Z6 458 aaKnown RBP13.5□□□□□ -0.25
NUP50-204ENST00000417702 DPRXA6NFQ7 191 aa13.49□□□□□ -0.25
NUP50-204ENST00000417702 M0QX08 132 aa13.49□□□□□ -0.25
NUP50-204ENST00000417702 FBP2O00757 339 aa13.49□□□□□ -0.25
NUP50-204ENST00000417702 TMCC2O75069 709 aa13.49□□□□□ -0.25
NUP50-204ENST00000417702 KRT33AO76009 404 aa13.49□□□□□ -0.25
NUP50-204ENST00000417702 P2RY4P51582 365 aa13.49□□□□□ -0.25
NUP50-204ENST00000417702 SEC24CP53992 1094 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms