RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 RAP2CQ9Y3L5 183 aa6.13□□□□□ -1.43
COPS3-202ENST00000417352 A0A096LPE4 126 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 A0A1W2PPZ6 126 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 SH3PXD2BA1X283 911 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 TMEM247A6NEH6 219 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 ZNF716A6NP11 495 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 ATP6V1G2-DDX39BF2Z307 99 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 HMGN4O00479 90 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 EIF1BO60739 113 aaKnown RBP6.12□□□□□ -1.43
COPS3-202ENST00000417352 PGM3O95394 542 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 C1QCP02747 245 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 GPIP06744 558 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 SONP18583 2426 aaKnown RBP6.12□□□□□ -1.43
COPS3-202ENST00000417352 CADP27708 2225 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 GTF2E2P29084 291 aaKnown RBP6.12□□□□□ -1.43
COPS3-202ENST00000417352 NTF4P34130 210 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 SLC1A3P43003 542 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 CAPZA2P47755 286 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 CLK1P49759 484 aaKnown RBP6.12□□□□□ -1.43
COPS3-202ENST00000417352 PSMA6P60900 246 aaKnown RBP6.12□□□□□ -1.43
COPS3-202ENST00000417352 UBE2NP61088 152 aaKnown RBP6.12□□□□□ -1.43
COPS3-202ENST00000417352 PHC1P78364 1004 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 GABRA6Q16445 453 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 SMU1Q2TAY7 513 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 HIKESHIQ53FT3 197 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 CEP85LQ5SZL2 805 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 SAXO2Q658L1 398 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 ATG16L1Q676U5 607 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 EMBQ6PCB8 327 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 FRRS1Q6ZNA5 592 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 SLC46A3Q7Z3Q1 461 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 HIPK1Q86Z02 1210 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 TMEM99Q8N816 258 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 TMEM158Q8WZ71 300 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 NEURL3Q96EH8 262 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 TRNT1Q96Q11 434 aaKnown RBP6.12□□□□□ -1.43
COPS3-202ENST00000417352 TNFRSF13CQ96RJ3 184 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 C20orf27Q9GZN8 174 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 SHARPINQ9H0F6 387 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 MTHFD2LQ9H903 347 aaPredicted RBP6.12□□□□□ -1.43
COPS3-202ENST00000417352 POLE3Q9NRF9 147 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 SLC7A10Q9NS82 523 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 RLIMQ9NVW2 624 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 TMEM45AQ9NWC5 275 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 OSGIN1Q9UJX0 560 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 TRAPPC4Q9Y296 219 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 SLC9A8Q9Y2E8 581 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 SLC25A15Q9Y619 301 aa6.12□□□□□ -1.43
COPS3-202ENST00000417352 IGKV3D-15A0A087WSY6 115 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 ZC3H12DA2A288 527 aaKnown RBP6.11□□□□□ -1.43
COPS3-202ENST00000417352 AGAP5A6NIR3 686 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 ZNF587BE7ETH6 402 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 RFXANKO14593 260 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 BIRC5O15392 142 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 PHF1O43189 567 aaPredicted RBP6.11□□□□□ -1.43
COPS3-202ENST00000417352 TYROBPO43914 113 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 KRT75O95678 551 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 PGRP06401 933 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 DBIP07108 87 aaKnown RBP6.11□□□□□ -1.43
COPS3-202ENST00000417352 CHRM4P08173 479 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 ITGA5P08648 1049 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 ZNF16P17020 682 aaPredicted RBP6.11□□□□□ -1.43
COPS3-202ENST00000417352 COX5AP20674 150 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 USF1P22415 310 aaPredicted RBP6.11□□□□□ -1.43
COPS3-202ENST00000417352 EPHA3P29320 983 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 APOBEC3AP31941 199 aaPredicted RBP6.11□□□□□ -1.43
COPS3-202ENST00000417352 CDKN2CP42773 168 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 SNRPD2P62316 118 aaKnown RBP6.11□□□□□ -1.43
COPS3-202ENST00000417352 TUBA1BP68363 451 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 TUBA4AP68366 448 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 KRTAP1-1Q07627 177 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 LGALS3BPQ08380 585 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 FUT5Q11128 374 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 C1DQ13901 141 aaKnown RBP6.11□□□□□ -1.43
COPS3-202ENST00000417352 CASP8Q14790 479 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 LARS2Q15031 903 aaKnown RBP6.11□□□□□ -1.43
COPS3-202ENST00000417352 PDK3Q15120 406 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 DPY19L1Q2PZI1 675 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 TMEM249Q2WGJ8 235 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 COX20Q5RI15 118 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 C6orf10Q5SRN2 563 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 MRPL2Q5T653 305 aaKnown RBP6.11□□□□□ -1.43
COPS3-202ENST00000417352 TSPO2Q5TGU0 170 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 PRAMEF8Q5VWM4 474 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 PRAMEF7Q5VXH5 474 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 ABLIM2Q6H8Q1 611 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 NIPAL3Q6P499 406 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 SEZ6L2Q6UXD5 910 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 B3GLCTQ6Y288 498 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 IL17RELQ6ZVW7 336 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 TUBA1AQ71U36 451 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 ABHD12BQ7Z5M8 362 aaPredicted RBP6.11□□□□□ -1.43
COPS3-202ENST00000417352 DTX2Q86UW9 622 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 VRK2Q86Y07 508 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 CMIPQ8IY22 773 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 OR52P1PQ8NH57 321 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 MIPOL1Q8TD10 442 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 TESCQ96BS2 214 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 TEX37Q96LM6 180 aa6.11□□□□□ -1.43
COPS3-202ENST00000417352 MUS81Q96NY9 551 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms