RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 C11orf65Q8NCR3 313 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 WFDC11Q8NEX6 87 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 BHLHE22Q8NFJ8 381 aaPredicted RBP13.78□□□□□ -0.2
ITGB1-204ENST00000417122 ELOA3Q8NG57 546 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 OR9K2Q8NGE7 335 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 AKAP1Q92667 903 aaKnown RBP eCLIP13.78□□□□□ -0.2
ITGB1-204ENST00000417122 TMEM45BQ96B21 275 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 MUCL1Q96DR8 90 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 C12orf10Q9HB07 376 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 FGFR1OP2Q9NVK5 253 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 TAS2R16Q9NYV7 291 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 UPB1Q9UBR1 384 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 SLC13A4Q9UKG4 626 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 RNF115Q9Y4L5 304 aa13.78□□□□□ -0.2
ITGB1-204ENST00000417122 HIVEP1P15822 2718 aa13.77□□□□□ -0.2
ITGB1-204ENST00000417122 A0A1B0GWA3 101 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 MFN2O95140 757 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 VAMP5O95183 116 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 AHSA1O95433 338 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 VIMP08670 466 aaKnown RBP13.77□□□□□ -0.21
ITGB1-204ENST00000417122 HTR2AP28223 471 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 P2RY4P51582 365 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 RGS8P57771 180 aaPredicted RBP13.77□□□□□ -0.21
ITGB1-204ENST00000417122 NCALDP61601 193 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 EGR4Q05215 589 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 BSPH1Q075Z2 132 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 DMTNQ08495 405 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 RBBP4Q09028 425 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 SF3A3Q12874 501 aaKnown RBP eCLIP13.77□□□□□ -0.21
ITGB1-204ENST00000417122 HSP90B2PQ58FF3 399 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 TSPO2Q5TGU0 170 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 SHEQ5VZ18 495 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 CGB2Q6NT52 195 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 C6orf89Q6UWU4 347 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 KRTAP1-3Q8IUG1 177 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 P3H2Q8IVL5 708 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 ZNF611Q8N823 705 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 ZIC4Q8N9L1 334 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 OR52E4Q8NGH9 312 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 MFSD8Q8NHS3 518 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 SLC25A36Q96CQ1 311 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 ZNF385AQ96PM9 386 aaKnown RBP13.77□□□□□ -0.21
ITGB1-204ENST00000417122 TRIM2Q9C040 744 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 PIF1Q9H611 641 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 KAT8Q9H7Z6 458 aaKnown RBP13.77□□□□□ -0.21
ITGB1-204ENST00000417122 SLC7A10Q9NS82 523 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 MRGBPQ9NV56 204 aa13.77□□□□□ -0.21
ITGB1-204ENST00000417122 TESQ9UGI8 421 aaKnown RBP13.77□□□□□ -0.21
ITGB1-204ENST00000417122 ZNF469Q96JG9 3925 aaPredicted RBP13.77□□□□□ -0.21
ITGB1-204ENST00000417122 DPRXA6NFQ7 191 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 FTCDNL1E5RQL4 147 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 PDLIM1O00151 329 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 FBP2O00757 339 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 CLOCKO15516 846 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 ARHGEF9O43307 516 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 ITGA5P08648 1049 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 PNMTP11086 282 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 RPS5P46782 204 aaKnown RBP13.76□□□□□ -0.21
ITGB1-204ENST00000417122 FOXG1P55316 489 aaPredicted RBP13.76□□□□□ -0.21
ITGB1-204ENST00000417122 PCBP3P57721 371 aaKnown RBP13.76□□□□□ -0.21
ITGB1-204ENST00000417122 GUCY1A3Q02108 690 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 GABRA6Q16445 453 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 ALG10BQ5I7T1 473 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 FAM91A1Q658Y4 838 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 OR7E24Q6IFN5 339 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 ADAM5Q6NVV9 412 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 ULK3Q6PHR2 472 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 AAED1Q7RTV5 226 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 NET1Q7Z628 596 aaPredicted RBP13.76□□□□□ -0.21
ITGB1-204ENST00000417122 SMYD1Q8NB12 490 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 OR52N5Q8NH56 324 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 LILRB1Q8NHL6 650 aaPredicted RBP13.76□□□□□ -0.21
ITGB1-204ENST00000417122 DNAJA4Q8WW22 397 aaPredicted RBP13.76□□□□□ -0.21
ITGB1-204ENST00000417122 KTI12Q96EK9 354 aaPredicted RBP13.76□□□□□ -0.21
ITGB1-204ENST00000417122 PTDSS2Q9BVG9 487 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 PRR14Q9BWN1 585 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 EVA1AQ9H8M9 152 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 TMEM27Q9HBJ8 222 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 RASD1Q9Y272 281 aa13.76□□□□□ -0.21
ITGB1-204ENST00000417122 M0QX08 132 aa13.75□□□□□ -0.21
ITGB1-204ENST00000417122 OR2T1O43869 369 aa13.75□□□□□ -0.21
ITGB1-204ENST00000417122 GTF2E2P29084 291 aaKnown RBP13.75□□□□□ -0.21
ITGB1-204ENST00000417122 CYLC2Q14093 348 aaPredicted RBP13.75□□□□□ -0.21
ITGB1-204ENST00000417122 OR1Q1Q15612 314 aa13.75□□□□□ -0.21
ITGB1-204ENST00000417122 TRMT5Q32P41 509 aaKnown RBP13.75□□□□□ -0.21
ITGB1-204ENST00000417122 C9orf135Q5VTT2 229 aa13.75□□□□□ -0.21
ITGB1-204ENST00000417122 C5orf46Q6UWT4 87 aa13.75□□□□□ -0.21
ITGB1-204ENST00000417122 CREB3L2Q70SY1 520 aa13.75□□□□□ -0.21
ITGB1-204ENST00000417122 RANBP3LQ86VV4 465 aaPredicted RBP13.75□□□□□ -0.21
ITGB1-204ENST00000417122 SLC30A8Q8IWU4 369 aa13.75□□□□□ -0.21
ITGB1-204ENST00000417122 OR10A6Q8NH74 314 aa13.75□□□□□ -0.21
ITGB1-204ENST00000417122 RNF217Q8TC41 542 aa13.75□□□□□ -0.21
ITGB1-204ENST00000417122 TMEM171Q8WVE6 324 aa13.75□□□□□ -0.21
ITGB1-204ENST00000417122 IGFBPL1Q8WX77 278 aa13.75□□□□□ -0.21
ITGB1-204ENST00000417122 SLC38A4Q969I6 547 aa13.75□□□□□ -0.21
ITGB1-204ENST00000417122 FBXW5Q969U6 566 aa13.75□□□□□ -0.21
ITGB1-204ENST00000417122 SLC47A1Q96FL8 570 aa13.75□□□□□ -0.21
ITGB1-204ENST00000417122 PERPQ96FX8 193 aa13.75□□□□□ -0.21
ITGB1-204ENST00000417122 MUS81Q96NY9 551 aa13.75□□□□□ -0.21
ITGB1-204ENST00000417122 WFDC6Q9BQY6 131 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms