RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 TNFRSF10DQ9UBN6 386 aa9.69□□□□□ -0.86
SMPD4P1-201ENST00000416717 CHRNA9Q9UGM1 479 aa9.69□□□□□ -0.86
SMPD4P1-201ENST00000416717 C11orf98E9PRG8 122 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 G3V3Y1 287 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 LIMS3P0CW19 117 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 LIMS4P0CW20 117 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 POLR2HP52434 150 aaKnown RBP9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 CTXN1P60606 82 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 C1DQ13901 141 aaKnown RBP9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 ZNF791Q3KP31 576 aaPredicted RBP9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 LIPKQ5VXJ0 399 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 NANOGNBQ7Z5D8 188 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 GID4Q8IVV7 300 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 PROKR2Q8NFJ6 384 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 SPACA9Q96E40 222 aaPredicted RBP9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 LIN37Q96GY3 246 aaPredicted RBP9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 Q96M85 177 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 TEAD3Q99594 435 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 CENPOQ9BU64 300 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 TTTY10Q9BZA0 68 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 MRPS18AQ9NVS2 196 aaKnown RBP9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 RIF1Q5UIP0 2472 aaKnown RBP9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 CCDC187A0A096LP49 1063 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 TEX13CA0A0J9YWL9 993 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 TRIM64BA6NI03 449 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 FAM171A2A8MVW0 826 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 CCRL2O00421 344 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 DLGAP3O95886 979 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 IFNGP01579 166 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 OPN1LWP04000 364 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 HIST1H2ABP04908 130 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 CYC1P08574 325 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 FBXO45P0C2W1 286 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 ENDOUP21128 410 aaKnown RBP9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 PSPHP78330 225 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 RPL18Q07020 188 aaKnown RBP9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 EXT1Q16394 746 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 TMEM44Q2T9K0 475 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 ALG10Q5BKT4 473 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 DPY19L2P2Q6ZN68 376 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 NDUFAF7Q7L592 441 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 HIST3H2AQ7L7L0 130 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 GRINAQ7Z429 371 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 PPP1R32Q7Z5V6 425 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 TMEM99Q8N816 258 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 DEFB124Q8NES8 71 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 OR10H4Q8NGA5 316 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 OR5M1Q8NGP8 315 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 TTC9Q92623 222 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 HIST1H2ACQ93077 130 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 KISS1RQ969F8 398 aaPredicted RBP9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 EXOSC4Q9NPD3 245 aaKnown RBP9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 ANKRD10Q9NXR5 420 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 BAIAP2Q9UQB8 552 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 FARSAQ9Y285 508 aaKnown RBP9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 SPIN1Q9Y657 262 aaPredicted RBP9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 CACNA1CQ13936 2221 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 PCSK5Q92824 1860 aa9.68□□□□□ -0.86
SMPD4P1-201ENST00000416717 IRGMA1A4Y4 181 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 CCDC182A6NF36 153 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 C12orf71A8MTZ7 269 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 SLC22A1O15245 554 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 ATP6V1G1O75348 118 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 PLGP00747 810 aaPredicted RBP9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 ASAH2BP0C7U1 165 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 NAGAP17050 411 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 PRKCAP17252 672 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 F8A1P23610 371 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 PTGDSP41222 190 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 CASP3P42574 277 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 WNT4P56705 351 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 PRPS1P60891 318 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 RPS4XP62701 263 aaKnown RBP9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 FOXK1P85037 733 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 NTRK2Q16620 822 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 TMEM164Q5U3C3 297 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 MISPQ8IVT2 679 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 SNRNP27Q8WVK2 155 aaKnown RBP9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 TM9SF4Q92544 642 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 TMEM203Q969S6 136 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 ZMYND19Q96E35 227 aaPredicted RBP9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 ZHX1-C8orf76Q96EF9 292 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 CCNL2Q96S94 520 aaPredicted RBP9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 ZPBPQ9BS86 351 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 DDA1Q9BW61 102 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 RACGAP1Q9H0H5 632 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 NRIP3Q9NQ35 241 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 EXOSC1Q9Y3B2 195 aaKnown RBP9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 MRPS18BQ9Y676 258 aaKnown RBP9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 MED13Q9UHV7 2174 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 TRAV36DV7A0A075B6V5 113 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 SPAARA0A1B0GVQ0 90 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 ANKUB1A6NFN9 424 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 H3BML4 177 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 H7C1C5 153 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 TNFSF15O95150 251 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 BGLAPP02818 100 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 SCG5P05408 212 aa9.67□□□□□ -0.86
SMPD4P1-201ENST00000416717 IL11P20809 199 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms