RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 REG4Q9BYZ8 158 aa13.64□□□□□ -0.23
ACTB-202ENST00000414620 PAIP1Q9H074 479 aaKnown RBP13.64□□□□□ -0.23
ACTB-202ENST00000414620 MGAT4BQ9UQ53 548 aa13.64□□□□□ -0.23
ACTB-202ENST00000414620 B3GALT5Q9Y2C3 310 aa13.64□□□□□ -0.23
ACTB-202ENST00000414620 PCDHB14Q9Y5E9 798 aa13.64□□□□□ -0.23
ACTB-202ENST00000414620 ALPK2Q86TB3 2170 aa13.64□□□□□ -0.23
ACTB-202ENST00000414620 ABCA2Q9BZC7 2435 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 CSPG4Q6UVK1 2322 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 FAM234BA2RU67 622 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 AQP7P3A6NL99 342 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 KIAA1324LA8MWY0 1029 aaPredicted RBP13.63□□□□□ -0.23
ACTB-202ENST00000414620 SSX4O60224 188 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 FABP6P51161 128 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 IRX1P78414 480 aaPredicted RBP13.63□□□□□ -0.23
ACTB-202ENST00000414620 LGALS3BPQ08380 585 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 DMTNQ08495 405 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 ZNF311Q5JNZ3 666 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 OR7E24Q6IFN5 339 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 EPGNQ6UW88 154 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 ZIC4Q8N9L1 334 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 GTF2H4Q92759 462 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 TMEM45BQ96B21 275 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 C3orf49Q96BT1 292 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 RADILQ96JH8 1075 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 DHRS9Q9BPW9 319 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 SPATA9Q9BWV2 254 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 AMBRA1Q9C0C7 1298 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 SLC17A5Q9NRA2 495 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 PARPBPQ9NWS1 579 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 DCTN4Q9UJW0 460 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 AMDHD2Q9Y303 409 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 ATP23Q9Y6H3 246 aa13.63□□□□□ -0.23
ACTB-202ENST00000414620 A0A0G2JPF8 293 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 A8MVM7 634 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 HNRNPCL2B2RXH8 293 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 HNRNPCL3B7ZW38 293 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 CLIC1O00299 241 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 NR5A2O00482 541 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 KLF11O14901 512 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 HNRNPCL1O60812 293 aaKnown RBP13.62□□□□□ -0.23
ACTB-202ENST00000414620 HNRNPCL4P0DMR1 293 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 TTKP33981 857 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 MAP2K6P52564 334 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 STX1BP61266 288 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 RGNQ15493 299 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 HIKESHIQ53FT3 197 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 C1orf140Q5VVS0 124 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 PRAMEF8Q5VWM4 474 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 PRAMEF7Q5VXH5 474 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 TMEM225Q6GV28 225 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 C11orf71Q6IPW1 123 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 FBXL14Q8N1E6 418 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 DEPDC4Q8N2C3 294 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 MUC15Q8N387 334 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 C1orf162Q8NEQ5 155 aaPredicted RBP13.62□□□□□ -0.23
ACTB-202ENST00000414620 ALKBH3Q96Q83 286 aaPredicted RBP13.62□□□□□ -0.23
ACTB-202ENST00000414620 EBF4Q9BQW3 602 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 SF3B5Q9BWJ5 86 aaKnown RBP13.62□□□□□ -0.23
ACTB-202ENST00000414620 SLCO1B3Q9NPD5 702 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 CBLN4Q9NTU7 201 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 ZNF232Q9UNY5 417 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 TLN2Q9Y4G6 2542 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 HIVEP2P31629 2446 aa13.62□□□□□ -0.23
ACTB-202ENST00000414620 ARFGEF3Q5TH69 2177 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 TMEM229AB2RXF0 380 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 C5orf58C9J3I9 102 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 POLR3GO15318 223 aaPredicted RBP13.61□□□□□ -0.23
ACTB-202ENST00000414620 KRT33AO76009 404 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 AHSA1O95433 338 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 HOXB9P17482 250 aaPredicted RBP13.61□□□□□ -0.23
ACTB-202ENST00000414620 MPGP29372 298 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 SELENOPP49908 381 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 P2RY4P51582 365 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 NUDT6P53370 316 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 NIPAL3Q6P499 406 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 KLHL24Q6TFL4 600 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 KDM8Q8N371 416 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 C17orf78Q8N4C9 275 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 GOLGA6L1Q8N7Z2 621 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 NFKBIDQ8NI38 313 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 BBS10Q8TAM1 723 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 SLC25A36Q96CQ1 311 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 ADAD1Q96M93 576 aaKnown RBP13.61□□□□□ -0.23
ACTB-202ENST00000414620 RAD21L1Q9H4I0 556 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 ARMC7Q9H6L4 198 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 BARX1Q9HBU1 254 aaPredicted RBP13.61□□□□□ -0.23
ACTB-202ENST00000414620 A4GALTQ9NPC4 353 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 TCF7L2Q9NQB0 619 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 THUMPD1Q9NXG2 353 aaKnown RBP13.61□□□□□ -0.23
ACTB-202ENST00000414620 SLC25A37Q9NYZ2 338 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 CCDC167Q9P0B6 97 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 ADAM21Q9UKJ8 722 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 IFT52Q9Y366 437 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 ABCA1O95477 2261 aa13.61□□□□□ -0.23
ACTB-202ENST00000414620 IGHV4-30-2A0A087WSY4 118 aa13.6□□□□□ -0.23
ACTB-202ENST00000414620 A0A096LPI6 279 aa13.6□□□□□ -0.23
ACTB-202ENST00000414620 ATP6V1G2-DDX39BF2Z307 99 aa13.6□□□□□ -0.23
ACTB-202ENST00000414620 LGI1O95970 557 aa13.6□□□□□ -0.23
ACTB-202ENST00000414620 RPS5P46782 204 aaKnown RBP13.6□□□□□ -0.23
ACTB-202ENST00000414620 IDH3AP50213 366 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms