RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 RBM34P42696 430 aaKnown RBP27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 KPNB1Q14974 876 aaKnown RBP27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 FGD3Q5JSP0 725 aa27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 FAM69AQ5T7M9 428 aa27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 C5orf46Q6UWT4 87 aa27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 FCRLAQ7L513 359 aa27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 CCDC103Q8IW40 242 aa27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 MFSD8Q8NHS3 518 aa27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 SLC7A13Q8TCU3 470 aa27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 ABHD3Q8WU67 409 aa27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 DHRS1Q96LJ7 313 aa27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 ZNF347Q96SE7 839 aa27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 EPYCQ99645 322 aa27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 RNF122Q9H9V4 155 aa27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 CLEC4AQ9UMR7 237 aa27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 A0A087WUU8 490 aa27.32■■□□□ 1.96
CSNK1E-206ENST00000413574 A0A0G2JNJ9 132 aa27.32■■□□□ 1.96
CSNK1E-206ENST00000413574 BGLAPP02818 100 aa27.32■■□□□ 1.96
CSNK1E-206ENST00000413574 AGFG1P52594 562 aaKnown RBP27.32■■□□□ 1.96
CSNK1E-206ENST00000413574 C10orf53Q8N6V4 93 aa27.32■■□□□ 1.96
CSNK1E-206ENST00000413574 TMEM99Q8N816 258 aa27.32■■□□□ 1.96
CSNK1E-206ENST00000413574 INTS12Q96CB8 462 aaKnown RBP27.32■■□□□ 1.96
CSNK1E-206ENST00000413574 RAB3IPQ96QF0 476 aaPredicted RBP27.32■■□□□ 1.96
CSNK1E-206ENST00000413574 TM9SF2Q99805 663 aa27.32■■□□□ 1.96
CSNK1E-206ENST00000413574 Q9UFV3 132 aa27.32■■□□□ 1.96
CSNK1E-206ENST00000413574 A0A1W2PRQ8 180 aa27.31■■□□□ 1.96
CSNK1E-206ENST00000413574 IL2RAP01589 272 aa27.31■■□□□ 1.96
CSNK1E-206ENST00000413574 CEACAM8P31997 349 aaPredicted RBP27.31■■□□□ 1.96
CSNK1E-206ENST00000413574 H3F3AP84243 136 aa27.31■■□□□ 1.96
CSNK1E-206ENST00000413574 FOXF2Q12947 444 aa27.31■■□□□ 1.96
CSNK1E-206ENST00000413574 DGCR6Q14129 220 aa27.31■■□□□ 1.96
CSNK1E-206ENST00000413574 PODNL1Q6PEZ8 512 aa27.31■■□□□ 1.96
CSNK1E-206ENST00000413574 MEX3DQ86XN8 651 aaKnown RBP27.31■■□□□ 1.96
CSNK1E-206ENST00000413574 CCDC71Q8IV32 467 aaPredicted RBP27.31■■□□□ 1.96
CSNK1E-206ENST00000413574 RNF128Q8TEB7 428 aa27.31■■□□□ 1.96
CSNK1E-206ENST00000413574 RND1Q92730 232 aa27.31■■□□□ 1.96
CSNK1E-206ENST00000413574 HS6ST2Q96MM7 605 aa27.31■■□□□ 1.96
CSNK1E-206ENST00000413574 SLC19A3Q9BZV2 496 aa27.31■■□□□ 1.96
CSNK1E-206ENST00000413574 CCM2LQ9NUG4 571 aaPredicted RBP27.31■■□□□ 1.96
CSNK1E-206ENST00000413574 KLHL13Q9P2N7 655 aa27.31■■□□□ 1.96
CSNK1E-206ENST00000413574 ENO4A6NNW6 628 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 OR2T1O43869 369 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 GADD45GO95257 159 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 CH25HO95992 272 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 PER3P56645 1201 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 PPP1R8Q12972 351 aaKnown RBP27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 SEC23BQ15437 767 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 ACOT11Q8WXI4 607 aaPredicted RBP27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 ZHX1-C8orf76Q96EF9 292 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 MED31Q9Y3C7 131 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 INTS1Q8N201 2190 aaKnown RBP27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 DNPH1O43598 174 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 ZG16O60844 167 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 FKBP6O75344 327 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 RCBTB2O95199 551 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 GRPRP30550 384 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 RIPPLY2Q5TAB7 128 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 ZNF730Q6ZMV8 503 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 NRMQ8IXM6 262 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 LRRC17Q8N6Y2 441 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 ANKRD19PQ9H560 264 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 VNN3Q9NY84 501 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 RNF6Q9Y252 685 aa27.3■■□□□ 1.96
CSNK1E-206ENST00000413574 USP9XQ93008 2570 aaPredicted RBP27.29■■□□□ 1.96
CSNK1E-206ENST00000413574 FCGR2AP12318 317 aa27.29■■□□□ 1.96
CSNK1E-206ENST00000413574 ACTR3P61158 418 aa27.29■■□□□ 1.96
CSNK1E-206ENST00000413574 ZNF74Q16587 644 aa27.29■■□□□ 1.96
CSNK1E-206ENST00000413574 OTUD3Q5T2D3 398 aaPredicted RBP27.29■■□□□ 1.96
CSNK1E-206ENST00000413574 PAQR6Q6TCH4 344 aa27.29■■□□□ 1.96
CSNK1E-206ENST00000413574 PAPD5Q8NDF8 572 aaKnown RBP27.29■■□□□ 1.96
CSNK1E-206ENST00000413574 FUZQ9BT04 418 aa27.29■■□□□ 1.96
CSNK1E-206ENST00000413574 DENND2DQ9H6A0 471 aaPredicted RBP27.29■■□□□ 1.96
CSNK1E-206ENST00000413574 COL12A1Q99715 3063 aa27.29■■□□□ 1.96
CSNK1E-206ENST00000413574 M0R082 166 aa27.28■■□□□ 1.96
CSNK1E-206ENST00000413574 EIF1BO60739 113 aaKnown RBP27.28■■□□□ 1.96
CSNK1E-206ENST00000413574 ZNF417Q8TAU3 575 aa27.28■■□□□ 1.96
CSNK1E-206ENST00000413574 ZNF587Q96SQ5 575 aaPredicted RBP27.28■■□□□ 1.96
CSNK1E-206ENST00000413574 KLHL4Q9C0H6 718 aa27.28■■□□□ 1.96
CSNK1E-206ENST00000413574 CYTIPO60759 359 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 RNF224P0DH78 156 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 TMIGD3P0DMS9 266 aaPredicted RBP27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 IFI30P13284 250 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 GTF2E2P29084 291 aaKnown RBP27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 P2RY4P51582 365 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 OR2T5Q6IEZ7 315 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 MBOAT2Q6ZWT7 520 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 SLC46A3Q7Z3Q1 461 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 OR2T29Q8NH02 315 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 ZNF775Q96BV0 537 aaPredicted RBP27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 NAA11Q9BSU3 229 aaPredicted RBP27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 C6orf203Q9P0P8 240 aaPredicted RBP27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 ING1Q9UK53 422 aaPredicted RBP27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 LYVE1Q9Y5Y7 322 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 TIPRLO75663 272 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 AGFG2O95081 481 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 CST1P01037 141 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 FUT1P19526 365 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 SMIM11AP58511 58 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 RASGEF1BQ0VAM2 473 aa27.27■■□□□ 1.96
CSNK1E-206ENST00000413574 EXOC3L2Q2M3D2 409 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms