RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ALDH9A1P49189 494 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 GZMMP51124 257 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 ARFIP1P53367 373 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 AP2S1P53680 142 aaPredicted RBP4.82□□□□□ -1.64
LINC00342-201ENST00000412393 IGLV3-21P80748 117 aaPredicted RBP4.82□□□□□ -1.64
LINC00342-201ENST00000412393 TNFRSF17Q02223 184 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.82□□□□□ -1.64
LINC00342-201ENST00000412393 TRAF3Q13114 568 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 BIKQ13323 160 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 TNK1Q13470 666 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 IRF3Q14653 427 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 RUNDC3AQ59EK9 446 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 C6orf136Q5SQH8 315 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 LRIF1Q5T3J3 769 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 MTFR2Q6P444 385 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 FAHD1Q6P587 224 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 CYP20A1Q6UW02 462 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 IL20RBQ6UXL0 311 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 HSDL2Q6YN16 418 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 MSANTD1Q6ZTZ1 278 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 ZNF767PQ75MW2 155 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 SLC46A3Q7Z3Q1 461 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 MDGA2Q7Z553 956 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 SLC51BQ86UW2 128 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 PLCZ1Q86YW0 608 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 GRAMD2AQ8IUY3 354 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 SIAH3Q8IW03 269 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 OR4N5Q8IXE1 308 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 GPALPP1Q8IXQ4 340 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 TCTE3Q8IZS6 198 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 FAM9CQ8IZT9 166 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 METTL4Q8N3J2 472 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 PARP16Q8N5Y8 322 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 ZNF321PQ8N8H1 164 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 L3MBTL4Q8NA19 623 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 PSD4Q8NDX1 1056 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 KBTBD8Q8NFY9 601 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 C16orf52Q8NHV5 167 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 WDR20Q8TBZ3 569 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 SLC2A12Q8TD20 617 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 PTPMT1Q8WUK0 201 aaPredicted RBP4.82□□□□□ -1.64
LINC00342-201ENST00000412393 ITLN2Q8WWU7 325 aaPredicted RBP4.82□□□□□ -1.64
LINC00342-201ENST00000412393 ASB15Q8WXK1 588 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 ANKRD9Q96BM1 317 aaPredicted RBP4.82□□□□□ -1.64
LINC00342-201ENST00000412393 MTFMTQ96DP5 389 aaKnown RBP4.82□□□□□ -1.64
LINC00342-201ENST00000412393 ZHX1-C8orf76Q96EF9 292 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 PHF21BQ96EK2 531 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 CEP19Q96LK0 163 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 DGAT2Q96PD7 388 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 RASL10BQ96S79 203 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 ZNF382Q96SR6 550 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 ITPAQ9BY32 194 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 DCSTAMPQ9H295 470 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 ACOXLQ9NUZ1 547 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 HPF1Q9NWY4 346 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 LYARQ9NX58 379 aaKnown RBP4.82□□□□□ -1.64
LINC00342-201ENST00000412393 MS4A12Q9NXJ0 267 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 COPS7AQ9UBW8 275 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 KCNN3Q9UGI6 736 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 TINAGQ9UJW2 476 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 ZNF221Q9UK13 617 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 ZNF835Q9Y2P0 537 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 NOSIPQ9Y314 301 aaKnown RBP4.82□□□□□ -1.64
LINC00342-201ENST00000412393 ATG4BQ9Y4P1 393 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 ORC6Q9Y5N6 252 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 LYVE1Q9Y5Y7 322 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 AUP1Q9Y679 476 aa4.82□□□□□ -1.64
LINC00342-201ENST00000412393 NBPF19A0A087WUL8 3843 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 A0A0A6YYD5 115 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 A0A1W2PR48 441 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 ELOVL7A1L3X0 281 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 FOXE1O00358 373 aaPredicted RBP4.81□□□□□ -1.64
LINC00342-201ENST00000412393 ZNHIT1O43257 154 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 PROM1O43490 865 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 TMPRSS11DO60235 418 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 HS6ST1O60243 411 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 OR10H2O60403 315 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 SNAPC5O75971 98 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 OR2J2O76002 312 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 ETHE1O95571 254 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 CRYZL1O95825 349 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 CST1P01037 141 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 SEMG1P04279 462 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 IL6P05231 212 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 YES1P07947 543 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 VSIG10L2P0DP72 767 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 NR2F6P10588 404 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 CD36P16671 472 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 HOXB9P17482 250 aaPredicted RBP4.81□□□□□ -1.64
LINC00342-201ENST00000412393 SDHAP31040 664 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 PTGER1P34995 402 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 RCVRNP35243 200 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 PIGAP37287 484 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 RFC3P40938 356 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 SOX3P41225 446 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 MASP1P48740 699 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 SMSP52788 366 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 DIO3P55073 304 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 BLOC1S1P78537 153 aa4.81□□□□□ -1.64
LINC00342-201ENST00000412393 ADORA2A-AS1P86434 159 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms