RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 IL1F10Q8WWZ1 152 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 NAT6Q93015 286 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 ZNF524Q96C55 264 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 MOCOSQ96EN8 888 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 XPO6Q96QU8 1125 aaKnown RBP3.74□□□□□ -1.81
BRCA1-204ENST00000412061 KCNA7Q96RP8 456 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 NODALQ96S42 347 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 LZTS2Q9BRK4 669 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 ZNF670Q9BS34 389 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 NDEL1Q9GZM8 345 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 NEUROG2Q9H2A3 272 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 OR52A5Q9H2C5 316 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 LIME1Q9H400 295 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 REEP4Q9H6H4 257 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 TXLNGQ9NUQ3 528 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 NUDT4Q9NZJ9 180 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 ADA2Q9NZK5 511 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 WRAP73Q9P2S5 460 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-204ENST00000412061 CIDEBQ9UHD4 219 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 ZNF229Q9UJW7 825 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 PROCRQ9UNN8 238 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 KCNIP3Q9Y2W7 256 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 ATP6V1DQ9Y5K8 247 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 USP16Q9Y5T5 823 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 STK36Q9NRP7 1315 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 PLEKHH1Q9ULM0 1364 aa3.74□□□□□ -1.81
BRCA1-204ENST00000412061 NSG1A0A0A6YYJ2 146 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 SAGE2PA6NJ88 616 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 PMS2P5A8MQ11 134 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 ARHGEF33A8MVX0 844 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 IDSB3KWA1 339 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 TRDCB7Z8K6 153 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 PRSS44E7EML9 344 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 BLOC1S5-TXNDC5H3BN57 136 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 HSD17B6O14756 317 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 OR7A10O76100 309 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 ZNF432O94892 652 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 SMC2O95347 1197 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 NADKO95544 446 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-204ENST00000412061 C1orf105O95561 183 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 IFNW1P05000 195 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 ALDOBP05062 364 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 FCGR3AP08637 254 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 WNT2P09544 360 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 NEFHP12036 1026 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 NR2C1P13056 603 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 GATA1P15976 413 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-204ENST00000412061 NQO2P16083 231 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 DPEP1P16444 411 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 SELEP16581 610 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 SDC1P18827 310 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 PMCHP20382 165 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 SERPINA2P20848 420 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 ANOS1P23352 680 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 TIMP3P35625 211 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 ETV5P41161 510 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 NSG1P42857 185 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 NPBWR2P48146 333 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 ARHGDIAP52565 204 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 PKNOX1P55347 436 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 GSTO1P78417 241 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 ZNF154Q13106 437 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 C18orf21Q32NC0 220 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-204ENST00000412061 SLC22A6Q4U2R8 563 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 KLHL22Q53GT1 634 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 EIPR1Q53HC9 387 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 ACER2Q5QJU3 275 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 PPM1LQ5SGD2 360 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 AP1ARQ63HQ0 302 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 RUSC1-AS1Q66K80 236 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 ULK3Q6PHR2 472 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 TRMT10CQ7L0Y3 403 aaKnown RBP3.73□□□□□ -1.81
BRCA1-204ENST00000412061 NR2C2APQ86WQ0 139 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 OR10H4Q8NGA5 316 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 RFESDQ8TAC1 157 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 TCP10LQ8TDR4 215 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 UFD1Q92890 307 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 STMN2Q93045 179 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 GLT1D1Q96MS3 346 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 TSSK3Q96PN8 268 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 ZNF317Q96PQ6 595 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-204ENST00000412061 ZC4H2Q9NQZ6 224 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 ELOVL2Q9NXB9 296 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 WWOXQ9NZC7 414 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 TMCO1Q9UM00 188 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 COPS3Q9UNS2 423 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 ERVW-1Q9UQF0 538 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 NTNG1Q9Y2I2 539 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 FBXO7Q9Y3I1 522 aa3.73□□□□□ -1.81
BRCA1-204ENST00000412061 TRBV9A0A0B4J1U6 114 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 A0A1W2PRD5 423 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 VSTM2BA6NLU5 285 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 NDUFAB1O14561 156 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 PPP1R2P9O14990 202 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 ZNF749O43361 778 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 PRKYO43930 277 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 MAGEC1O60732 1142 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 CEACAM4O75871 244 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 COX5AP20674 150 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 IL12BP29460 328 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms