RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 VASH1Q7L8A9 365 aaPredicted RBP12.4□□□□□ -0.42
LIMS1-205ENST00000410093 KCTD20Q7Z5Y7 419 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 MARCH9Q86YJ5 346 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 ZNF441Q8N8Z8 693 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 CEP76Q8TAP6 659 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 ASB15Q8WXK1 588 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 TSLPQ969D9 159 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 TM9SF2Q99805 663 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 NUDT9Q9BW91 350 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 MFRPQ9BY79 579 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 NMNAT2Q9BZQ4 307 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 VN1R1Q9GZP7 353 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 RHBDL2Q9NX52 303 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 QPCTLQ9NXS2 382 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 DHCR7Q9UBM7 475 aaKnown RBP12.4□□□□□ -0.42
LIMS1-205ENST00000410093 PPIEQ9UNP9 301 aaKnown RBP12.4□□□□□ -0.42
LIMS1-205ENST00000410093 PCDHGB2Q9Y5G2 931 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 IER3IP1Q9Y5U9 82 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 GON4LQ3T8J9 2241 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 DMXL1Q9Y485 3027 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 ANKRD61A6NGH8 418 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 NDUFB5O43674 189 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 LALBAP00709 142 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 HIST1H2ABP04908 130 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 CFIP05156 583 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 CD14P08571 375 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 ASAH2BP0C7U1 165 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 NAGAP17050 411 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 GBX2P52951 348 aaPredicted RBP12.39□□□□□ -0.43
LIMS1-205ENST00000410093 SCN1BQ07699 218 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 PLCXD2Q0VAA5 305 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 NNATQ16517 81 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 TRIM61Q5EBN2 209 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 TCEAL6Q6IPX3 200 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 HIST3H2AQ7L7L0 130 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 OR6S1Q8NH40 331 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 ZNF563Q8TA94 476 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 HIST1H2ACQ93077 130 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 TCEAL3Q969E4 200 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 SNX18Q96RF0 628 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 ADOQ96SZ5 270 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 TMED9Q9BVK6 235 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 TBL1XR1Q9BZK7 514 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 SEMA4CQ9C0C4 833 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 TPK1Q9H3S4 243 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 MED20Q9H944 212 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 MMP25Q9NPA2 562 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 MKL2Q9ULH7 1088 aa12.39□□□□□ -0.43
LIMS1-205ENST00000410093 IGKV1D-42A0A075B6H8 117 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 A0A1W2PQL4 384 aaPredicted RBP12.38□□□□□ -0.43
LIMS1-205ENST00000410093 HSPB2A8KAH6 182 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 OGG1O15527 345 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 SEC14L5O43304 696 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 GPRIN2O60269 458 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 GATBO75879 557 aaKnown RBP12.38□□□□□ -0.43
LIMS1-205ENST00000410093 GLCEO94923 617 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 HIST1H1CP16403 213 aaKnown RBP12.38□□□□□ -0.43
LIMS1-205ENST00000410093 MYL9P24844 172 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 SDHAP31040 664 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 CD97P48960 835 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 MAP2K6P52564 334 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 SUMO3P55854 103 aaPredicted RBP12.38□□□□□ -0.43
LIMS1-205ENST00000410093 SLC26A5P58743 744 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 RIN1Q13671 783 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 CD226Q15762 336 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 HSPB2Q16082 182 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 GLYR1Q49A26 553 aaPredicted RBP12.38□□□□□ -0.43
LIMS1-205ENST00000410093 CDONQ4KMG0 1287 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 PEAR1Q5VY43 1037 aaPredicted RBP12.38□□□□□ -0.43
LIMS1-205ENST00000410093 TRILQ7L0X0 811 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 C9orf40Q8IXQ3 194 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 TMEM99Q8N816 258 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 NPEPL1Q8NDH3 523 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 OR8K3Q8NH51 312 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 NUBPLQ8TB37 319 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 SAP25Q8TEE9 199 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 CHAC2Q8WUX2 184 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.38□□□□□ -0.43
LIMS1-205ENST00000410093 CLIP3Q96DZ5 547 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 ARSGQ96EG1 525 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 GAL3ST4Q96RP7 486 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 DDOQ99489 341 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 TIMP4Q99727 224 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 HCAR1Q9BXC0 346 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 SRRQ9GZT4 340 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 TMEM9BQ9NQ34 198 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 RABL2AQ9UBK7 228 aaPredicted RBP12.38□□□□□ -0.43
LIMS1-205ENST00000410093 PILRBQ9UKJ0 227 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 RABL2BQ9UNT1 228 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 GRIP1Q9Y3R0 1128 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 V9GYH0 126 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 UNC13CQ8NB66 2214 aa12.38□□□□□ -0.43
LIMS1-205ENST00000410093 CACNA1EQ15878 2313 aa12.37□□□□□ -0.43
LIMS1-205ENST00000410093 LNP1A1A4G5 178 aa12.37□□□□□ -0.43
LIMS1-205ENST00000410093 OR2W5A6NFC9 320 aa12.37□□□□□ -0.43
LIMS1-205ENST00000410093 FABP12A6NFH5 140 aa12.37□□□□□ -0.43
LIMS1-205ENST00000410093 A8MU76 341 aa12.37□□□□□ -0.43
LIMS1-205ENST00000410093 A8MUA0 341 aa12.37□□□□□ -0.43
LIMS1-205ENST00000410093 MCIDASD6RGH6 385 aa12.37□□□□□ -0.43
LIMS1-205ENST00000410093 ICOSLGO75144 302 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms