RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TTC5Q8N0Z6 440 aa2.29□□□□□ -2.04
PMS1-203ENST00000409593 OR4K14Q8NGD5 310 aa2.29□□□□□ -2.04
PMS1-203ENST00000409593 SEC22AQ96IW7 307 aa2.29□□□□□ -2.04
PMS1-203ENST00000409593 C4orf36Q96KX1 117 aa2.29□□□□□ -2.04
PMS1-203ENST00000409593 ZNF670Q9BS34 389 aa2.29□□□□□ -2.04
PMS1-203ENST00000409593 EDEM2Q9BV94 578 aa2.29□□□□□ -2.04
PMS1-203ENST00000409593 ZNF416Q9BWM5 594 aa2.29□□□□□ -2.04
PMS1-203ENST00000409593 CLMPQ9H6B4 373 aa2.29□□□□□ -2.04
PMS1-203ENST00000409593 LHX9Q9NQ69 397 aa2.29□□□□□ -2.04
PMS1-203ENST00000409593 ODF2LQ9ULJ1 636 aa2.29□□□□□ -2.04
PMS1-203ENST00000409593 NPIPA1Q9UND3 350 aa2.29□□□□□ -2.04
PMS1-203ENST00000409593 HEBP2Q9Y5Z4 205 aa2.29□□□□□ -2.04
PMS1-203ENST00000409593 SLC25A15Q9Y619 301 aa2.29□□□□□ -2.04
PMS1-203ENST00000409593 PIKFYVEQ9Y2I7 2098 aa2.29□□□□□ -2.04
PMS1-203ENST00000409593 UGT1A9O60656 530 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 SS18L1O75177 396 aaPredicted RBP2.28□□□□□ -2.04
PMS1-203ENST00000409593 KLK3P07288 261 aaPredicted RBP2.28□□□□□ -2.04
PMS1-203ENST00000409593 POU2F1P14859 743 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 IGFBP3P17936 291 aaPredicted RBP2.28□□□□□ -2.04
PMS1-203ENST00000409593 NT5EP21589 574 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 ARRB1P49407 418 aaPredicted RBP2.28□□□□□ -2.04
PMS1-203ENST00000409593 PKNOX1P55347 436 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 ACTA2P62736 377 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 ACTC1P68032 377 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 MOBPQ13875 183 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 LY6EQ16553 131 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 SLC25A52Q3SY17 297 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 GGTA1PQ4G0N0 100 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 GPR157Q5UAW9 335 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 FRMPD2BQ6IN97 320 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 ZNF620Q6ZNG0 422 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 CLEC4FQ8N1N0 589 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 RAET1EQ8TD07 263 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 PAGE5Q96GU1 130 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 TAAR1Q96RJ0 339 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 IFI27L2Q9H2X8 130 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 POPDC2Q9HBU9 364 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 U3KQV3 271 aa2.28□□□□□ -2.04
PMS1-203ENST00000409593 SF3B1O75533 1304 aaKnown RBP eCLIP2.28□□□□□ -2.043e-9■■■■■ 206.8
PMS1-203ENST00000409593 RBMY1BA6NDE4 496 aaKnown RBP2.28□□□□□ -2.05
PMS1-203ENST00000409593 RBMY1EA6NEQ0 496 aaKnown RBP2.28□□□□□ -2.05
PMS1-203ENST00000409593 N4BP1O75113 896 aaKnown RBP2.28□□□□□ -2.05
PMS1-203ENST00000409593 OPN1MWP04001 364 aa2.28□□□□□ -2.05
PMS1-203ENST00000409593 RBMY1DP0C7P1 496 aaKnown RBP2.28□□□□□ -2.05
PMS1-203ENST00000409593 RBMY1A1P0DJD3 496 aaKnown RBP2.28□□□□□ -2.05
PMS1-203ENST00000409593 OPN1MW2P0DN77 364 aa2.28□□□□□ -2.05
PMS1-203ENST00000409593 OPN1MW3P0DN78 364 aa2.28□□□□□ -2.05
PMS1-203ENST00000409593 ABOP16442 354 aa2.28□□□□□ -2.05
PMS1-203ENST00000409593 COX5AP20674 150 aa2.28□□□□□ -2.05
PMS1-203ENST00000409593 HTR2AP28223 471 aa2.28□□□□□ -2.05
PMS1-203ENST00000409593 IL1RL1Q01638 556 aa2.28□□□□□ -2.05
PMS1-203ENST00000409593 GRB7Q14451 532 aa2.28□□□□□ -2.05
PMS1-203ENST00000409593 RFX4Q33E94 735 aa2.28□□□□□ -2.05
PMS1-203ENST00000409593 FAM3CQ92520 227 aa2.28□□□□□ -2.05
PMS1-203ENST00000409593 CMTM7Q96FZ5 175 aa2.28□□□□□ -2.05
PMS1-203ENST00000409593 SH3YL1Q96HL8 342 aaPredicted RBP2.28□□□□□ -2.05
PMS1-203ENST00000409593 NIPSNAP3BQ9BS92 247 aa2.28□□□□□ -2.05
PMS1-203ENST00000409593 RNF167Q9H6Y7 350 aa2.28□□□□□ -2.05
PMS1-203ENST00000409593 QPCTLQ9NXS2 382 aa2.28□□□□□ -2.05
PMS1-203ENST00000409593 RASD1Q9Y272 281 aa2.28□□□□□ -2.05
PMS1-203ENST00000409593 DOCK9Q9BZ29 2069 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 NSG1A0A0A6YYJ2 146 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 CLDN3O15551 220 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 SUPT3HO75486 399 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 AK1P00568 194 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 MRPL3P09001 348 aaKnown RBP2.27□□□□□ -2.05
PMS1-203ENST00000409593 CXCL5P42830 114 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 RPS14P62263 151 aaKnown RBP2.27□□□□□ -2.05
PMS1-203ENST00000409593 KIAA0087Q14695 138 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 FAM83EQ2M2I3 478 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 MARCH8Q5T0T0 291 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 LYPD1Q8N2G4 141 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 OR2L13Q8N349 312 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 FADS6Q8N9I5 356 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 CATSPER1Q8NEC5 780 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 SPRYD4Q8WW59 207 aaPredicted RBP2.27□□□□□ -2.05
PMS1-203ENST00000409593 ACTR6Q9GZN1 396 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 RBKSQ9H477 322 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 ZNF226Q9NYT6 803 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 IL36GQ9NZH8 169 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 ZNF835Q9Y2P0 537 aa2.27□□□□□ -2.05
PMS1-203ENST00000409593 MAPK13O15264 365 aa2.26□□□□□ -2.05
PMS1-203ENST00000409593 RETP07949 1114 aa2.26□□□□□ -2.05
PMS1-203ENST00000409593 ZNF286BP0CG31 522 aa2.26□□□□□ -2.05
PMS1-203ENST00000409593 TDGF1P13385 188 aa2.26□□□□□ -2.05
PMS1-203ENST00000409593 NPR2P20594 1047 aa2.26□□□□□ -2.05
PMS1-203ENST00000409593 TDO2P48775 406 aa2.26□□□□□ -2.05
PMS1-203ENST00000409593 GPM6AP51674 278 aa2.26□□□□□ -2.05
PMS1-203ENST00000409593 TDGF1P3P51864 188 aa2.26□□□□□ -2.05
PMS1-203ENST00000409593 CYTH1Q15438 398 aa2.26□□□□□ -2.05
PMS1-203ENST00000409593 GRAMD2AQ8IUY3 354 aa2.26□□□□□ -2.05
PMS1-203ENST00000409593 CCDC65Q8IXS2 484 aa2.26□□□□□ -2.05
PMS1-203ENST00000409593 RNF182Q8N6D2 247 aa2.26□□□□□ -2.05
PMS1-203ENST00000409593 GPA33Q99795 319 aa2.26□□□□□ -2.05
PMS1-203ENST00000409593 SRMSQ9H3Y6 488 aa2.26□□□□□ -2.05
PMS1-203ENST00000409593 ACTR3BQ9P1U1 418 aa2.26□□□□□ -2.05
PMS1-203ENST00000409593 SEC14L3Q9UDX4 400 aa2.26□□□□□ -2.05
PMS1-203ENST00000409593 RPL36Q9Y3U8 105 aaKnown RBP2.26□□□□□ -2.05
PMS1-203ENST00000409593 MROH7-TTC4A0A0A0MT08 1334 aa2.26□□□□□ -2.05
PMS1-203ENST00000409593 IGKV1D-17A0A075B6S4 117 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms