RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 CCT8L1PA6NM43 557 aa12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 OR2T1O43869 369 aa12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 PNMTP11086 282 aa12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 SLC6A2P23975 617 aa12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 ADSLP30566 484 aaPredicted RBP12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 PTH2RP49190 550 aa12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 RPS4XP62701 263 aaKnown RBP12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 CEACAM7Q14002 265 aa12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 STK11Q15831 433 aa12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 ZNF672Q499Z4 452 aaPredicted RBP12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 AGKQ53H12 422 aa12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 OTUD3Q5T2D3 398 aaPredicted RBP12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 YTHDF3Q7Z739 585 aaKnown RBP12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 KRTAP1-3Q8IUG1 177 aa12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 DEPDC4Q8N2C3 294 aa12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 CADM2Q8N3J6 435 aa12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 MFSD8Q8NHS3 518 aa12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 SMAP2Q8WU79 429 aaPredicted RBP12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 DNAJA4Q8WW22 397 aaPredicted RBP12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 EBF4Q9BQW3 602 aa12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 MOV10Q9HCE1 1003 aaKnown RBP12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 RASD1Q9Y272 281 aa12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 MAGED1Q9Y5V3 778 aaPredicted RBP12.82□□□□□ -0.36
NIF3L1-205ENST00000409588 VPS13CQ709C8 3753 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 FLNAP21333 2647 aaKnown RBP12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 DSCAMO60469 2012 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 ZFHX3Q15911 3703 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 DPRXA6NFQ7 191 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 PDLIM1O00151 329 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 NPIPB7O75200 414 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 PLAUP00749 431 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 ARAFP10398 606 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 CDK6Q00534 326 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 BSPH1Q075Z2 132 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 FAPQ12884 760 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 TSC22D1Q15714 1073 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 GABRA6Q16445 453 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 GTDC1Q4AE62 458 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 GCNT6Q5T4J0 391 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 C1orf140Q5VVS0 124 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 ALKBH2Q6NS38 261 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 DHRS4L2Q6PKH6 230 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 LILRB1Q8NHL6 650 aaPredicted RBP12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 ZNF317Q96PQ6 595 aaPredicted RBP12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 TRIM2Q9C040 744 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 AMBRA1Q9C0C7 1298 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 SLC25A37Q9NYZ2 338 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 RPS6KB2Q9UBS0 482 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 LEF1Q9UJU2 399 aaPredicted RBP12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 LAMP3Q9UQV4 416 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 NDUFAF1Q9Y375 327 aa12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 ZNF469Q96JG9 3925 aaPredicted RBP12.81□□□□□ -0.36
NIF3L1-205ENST00000409588 FREM1Q5H8C1 2179 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 ACANP16112 2415 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 ARID1AO14497 2285 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 TRBV5-3A0A0A0MS03 114 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 ZC3H12DA2A288 527 aaKnown RBP12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 OVOL3O00110 214 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 NR5A2O00482 541 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 CLOCKO15516 846 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 DANCRP0C864 163 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 H2AFXP16104 143 aaPredicted RBP12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 MPGP29372 298 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 NTF4P34130 210 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 RBBP4Q09028 425 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 MFSD13AQ14CX5 517 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 OR7A5Q15622 319 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 FAM91A1Q658Y4 838 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 ULK3Q6PHR2 472 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 C6orf89Q6UWU4 347 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 SEZ6L2Q6UXD5 910 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 CASP12Q6UXS9 341 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 AAED1Q7RTV5 226 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 ATG4DQ86TL0 474 aaPredicted RBP12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 SERPINA11Q86U17 422 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 SLC30A8Q8IWU4 369 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 DPP10Q8N608 796 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 TMEM99Q8N816 258 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 OR9K2Q8NGE7 335 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 MAL2Q969L2 176 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 C3orf49Q96BT1 292 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 PERPQ96FX8 193 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 OBP2BQ9NPH6 170 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 CISD1Q9NZ45 108 aaKnown RBP12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 VAPAQ9P0L0 249 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 AMDHD2Q9Y303 409 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 CHST2Q9Y4C5 530 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 SLC25A15Q9Y619 301 aa12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 RAI1Q7Z5J4 1906 aaPredicted RBP12.8□□□□□ -0.36
NIF3L1-205ENST00000409588 LOC102725191A0A1B0GVB3 256 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 ELOA3DA6NLF2 546 aaPredicted RBP12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 TMEM229AB2RXF0 380 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 AKR7A3O95154 331 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 AHSA1O95433 338 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 WNT11O96014 354 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 PRG2P13727 222 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 EDNRAP25101 427 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 ATP5J2P56134 94 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 PRPS1P60891 318 aa12.79□□□□□ -0.36
NIF3L1-205ENST00000409588 ELOA3BQ3SY89 546 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms