RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 Q96M85 177 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 FKRPQ9H9S5 495 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 POLMQ9NP87 494 aaPredicted RBP12.32□□□□□ -0.44
COL6A2-204ENST00000409416 ING4Q9UNL4 249 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 FANCMQ8IYD8 2048 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 PHF3Q92576 2039 aaKnown RBP12.32□□□□□ -0.44
COL6A2-204ENST00000409416 C17orf105B2RV13 164 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 TMEM150CB9EJG8 249 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 MLC1Q15049 377 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 BICRALQ6AI39 1079 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 GID4Q8IVV7 300 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 OR5J2Q8NH18 312 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 GPR119Q8TDV5 335 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 GHSRQ92847 366 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 MOAP1Q96BY2 351 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 OR14A2Q96R54 314 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 SLC23A1Q9UHI7 598 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.31□□□□□ -0.44
COL6A2-204ENST00000409416 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.31□□□□□ -0.44
COL6A2-204ENST00000409416 RFPL3O75679 317 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 GPR75O95800 540 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 HIST1H2ABP04908 130 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 ZGLP1P0C6A0 271 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 PRKAR1BP31321 381 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 CLDN20P56880 219 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 OR1D5P58170 312 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 FOXK2Q01167 660 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 EOGTQ5NDL2 527 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 HIST3H2AQ7L7L0 130 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 JAZF1Q86VZ6 243 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 HIST1H2ACQ93077 130 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 KIAA1143Q96AT1 154 aaPredicted RBP12.31□□□□□ -0.44
COL6A2-204ENST00000409416 ADAD1Q96M93 576 aaKnown RBP12.31□□□□□ -0.44
COL6A2-204ENST00000409416 TIMM29Q9BSF4 260 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 FLRT3Q9NZU0 649 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 POLR1DQ9Y2S0 133 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 HEBP2Q9Y5Z4 205 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 CACNG2Q9Y698 323 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 PCNX1Q96RV3 2341 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 ATP6V1G2-DDX39BF2Z307 99 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 FZD7O75084 574 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 F8A1P23610 371 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 HLA-DMAP28067 261 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 HTR2AP28223 471 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 DHPSP49366 369 aaPredicted RBP12.31□□□□□ -0.44
COL6A2-204ENST00000409416 ARRB1P49407 418 aaPredicted RBP12.31□□□□□ -0.44
COL6A2-204ENST00000409416 CBLN3Q6UW01 205 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 ARIH2OSQ8N7S6 290 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 OR52N1Q8NH53 320 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 ABHD4Q8TB40 342 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 ABHD1Q96SE0 405 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 SEMA4CQ9C0C4 833 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 NT5DC2Q9H857 520 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 Q9N2J8 555 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 MRPS33Q9Y291 106 aaKnown RBP12.31□□□□□ -0.44
COL6A2-204ENST00000409416 TEX13CA0A0J9YWL9 993 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 TRAPPC2P0DI81 140 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 TRAPPC2BP0DI82 140 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 ZNF3P17036 446 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 DGCR2P98153 550 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 ZMYND11Q15326 602 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 RNLSQ5VYX0 342 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 CARD17Q5XLA6 110 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 OR4D9Q8NGE8 314 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 TEAD3Q99594 435 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 CACNG6Q9BXT2 260 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 TSPAN10Q9H1Z9 355 aaPredicted RBP12.31□□□□□ -0.44
COL6A2-204ENST00000409416 ACOXLQ9NUZ1 547 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 MRPL39Q9NYK5 338 aaKnown RBP12.31□□□□□ -0.44
COL6A2-204ENST00000409416 CES1P1Q9UKY3 287 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 APC2O95996 2303 aa12.31□□□□□ -0.44
COL6A2-204ENST00000409416 TMEM72A0PK05 275 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 KHDRBS3O75525 346 aaKnown RBP12.3□□□□□ -0.44
COL6A2-204ENST00000409416 SLC25A12O75746 678 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 GATBO75879 557 aaKnown RBP12.3□□□□□ -0.44
COL6A2-204ENST00000409416 CFIP05156 583 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 RAB3BP20337 219 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 STOMP27105 288 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 EFNB1P98172 346 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 FGFBP1Q14512 234 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 TMEM44Q2T9K0 475 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 EIPR1Q53HC9 387 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 SLC25A30Q5SVS4 291 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 ARHGAP40Q5TG30 622 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 C1QL3Q5VWW1 255 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 HBMQ6B0K9 141 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 VASNQ6EMK4 673 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 CHRDL2Q6WN34 429 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 LRRC69Q6ZNQ3 347 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 LSMEM1Q8N8F7 131 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 FAM181AQ8N9Y4 354 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 TSEN15Q8WW01 171 aaKnown RBP12.3□□□□□ -0.44
COL6A2-204ENST00000409416 C5orf34Q96MH7 638 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 OR2A5Q96R48 311 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 EIF3KQ9UBQ5 218 aaKnown RBP12.3□□□□□ -0.44
COL6A2-204ENST00000409416 SLC17A4Q9Y2C5 497 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 SOX1O00570 391 aaPredicted RBP12.3□□□□□ -0.44
COL6A2-204ENST00000409416 RCBTB2O95199 551 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 C1QBP02746 253 aa12.3□□□□□ -0.44
COL6A2-204ENST00000409416 HIST1H1CP16403 213 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms