RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 KRT77Q7Z794 578 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 OR51S1Q8NGJ8 323 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 OR10R2Q8NGX6 335 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 NUBPLQ8TB37 319 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 ISOC2Q96AB3 205 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 SLITRK2Q9H156 845 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 EXO5Q9H790 373 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 TMEM27Q9HBJ8 222 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 MMP26Q9NRE1 261 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 P2RX2Q9UBL9 471 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 NTNG1Q9Y2I2 539 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 LTBP3Q9NS15 1303 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 LOC390937A0A1W2PQ73 354 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 CCSO14618 274 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 LILRB5O75023 590 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 MTX2O75431 263 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 PPP1R3DO95685 299 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 SFTA3P0C7M3 94 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 TMIGD3P0DMS9 266 aaPredicted RBP11.79□□□□□ -0.52
HERC3-203ENST00000407637 CD79AP11912 226 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 CERS1P27544 350 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 GABRR2P28476 465 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 GJA5P36382 358 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 PNLIPRP1P54315 467 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 MEF2AQ02078 507 aaPredicted RBP11.79□□□□□ -0.52
HERC3-203ENST00000407637 TP53I3Q53FA7 332 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 KRBOX4Q5JUW0 171 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 TPGS1Q6ZTW0 290 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 NRMQ8IXM6 262 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 LMNTD1Q8N9Z9 388 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 CPNE4Q96A23 557 aaPredicted RBP11.79□□□□□ -0.52
HERC3-203ENST00000407637 S100A16Q96FQ6 103 aaKnown RBP11.79□□□□□ -0.52
HERC3-203ENST00000407637 TEAD3Q99594 435 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 TSPAN10Q9H1Z9 355 aaPredicted RBP11.79□□□□□ -0.52
HERC3-203ENST00000407637 POFUT1Q9H488 388 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 FKRPQ9H9S5 495 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 NRIP3Q9NQ35 241 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 DMRT3Q9NQL9 472 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 TRPC4Q9UBN4 977 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 SH2B3Q9UQQ2 575 aa11.79□□□□□ -0.52
HERC3-203ENST00000407637 CPED1A4D0V7 1026 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 GGT3PA6NGU5 568 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 SULT2B1O00204 365 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 CD8AP01732 235 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 RB1P06400 928 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 FAUP35544 74 aaKnown RBP11.78□□□□□ -0.52
HERC3-203ENST00000407637 OR2B8PP59922 312 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 HGFACQ04756 655 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 RFLNAQ6ZTI6 216 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 ACOT7LQ6ZUV0 252 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 OVCH1Q7RTY7 1134 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 CMTM3Q96MX0 182 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 TGIF2Q9GZN2 237 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 OR51V1Q9H2C8 321 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 UBQLN3Q9H347 655 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 DENND4CQ5VZ89 1909 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 ANAPC1Q9H1A4 1944 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 A0A1W2PPH5 198 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 IFITM5A6NNB3 132 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 NPIPB9F8W1W9 429 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 EMC8O43402 210 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 MT-ND4LP03901 98 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 HPGDP15428 266 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 RBP2P50120 134 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 VASPP50552 380 aaPredicted RBP11.78□□□□□ -0.52
HERC3-203ENST00000407637 ST8SIA6P61647 398 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 PJVKQ0ZLH3 352 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 TAF10Q12962 218 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 SLBPQ14493 270 aaKnown RBP eCLIP11.78□□□□□ -0.52
HERC3-203ENST00000407637 ZNF697Q5TEC3 545 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 PWWP2BQ6NUJ5 590 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 GPR142Q7Z601 462 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 NLGN2Q8NFZ4 835 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 OR6J1Q8NGC5 347 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 OR6N1Q8NGY5 312 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 ASB13Q8WXK3 278 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 S100PBPQ96BU1 408 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 LURAP1Q96LR2 239 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 SUV39H2Q9H5I1 410 aa11.78□□□□□ -0.52
HERC3-203ENST00000407637 SIRT3Q9NTG7 399 aaPredicted RBP11.78□□□□□ -0.52
HERC3-203ENST00000407637 MEIS3P1A6NDR6 274 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 M0QZQ0 153 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 CDC42EP2O14613 210 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 SLC16A5O15375 505 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 RDH16O75452 317 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 IGSF6O95976 241 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 CLUP10909 449 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 NDUFV2P19404 249 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 ATP1B3P54709 279 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 MRPS10P82664 201 aaKnown RBP11.77□□□□□ -0.52
HERC3-203ENST00000407637 ZNF234Q14588 700 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 IRF4Q15306 451 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 PRPF38BQ5VTL8 546 aaKnown RBP11.77□□□□□ -0.52
HERC3-203ENST00000407637 SLCO4C1Q6ZQN7 724 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 GAREM2Q75VX8 874 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 REC114Q7Z4M0 266 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 TMED6Q8WW62 240 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 SLC39A7Q92504 469 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 SEC22AQ96IW7 307 aa11.77□□□□□ -0.52
HERC3-203ENST00000407637 HS6ST2Q96MM7 605 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms