RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 BIVMQ86UB2 503 aa9□□□□□ -0.97
MSH2-202ENST00000406134 IZUMO1Q8IYV9 350 aa9□□□□□ -0.97
MSH2-202ENST00000406134 ZNF615Q8N8J6 731 aa9□□□□□ -0.97
MSH2-202ENST00000406134 OR11G2Q8NGC1 345 aa9□□□□□ -0.97
MSH2-202ENST00000406134 OR4C6Q8NH72 309 aa9□□□□□ -0.97
MSH2-202ENST00000406134 LGALS14Q8TCE9 139 aa9□□□□□ -0.97
MSH2-202ENST00000406134 C3orf49Q96BT1 292 aa9□□□□□ -0.97
MSH2-202ENST00000406134 SIPA1Q96FS4 1042 aa9□□□□□ -0.97
MSH2-202ENST00000406134 GPX7Q96SL4 187 aaPredicted RBP9□□□□□ -0.97
MSH2-202ENST00000406134 POT1Q9NUX5 634 aa9□□□□□ -0.97
MSH2-202ENST00000406134 NCDNQ9UBB6 729 aa9□□□□□ -0.97
MSH2-202ENST00000406134 ELF5Q9UKW6 265 aaPredicted RBP9□□□□□ -0.97
MSH2-202ENST00000406134 BAIAP2Q9UQB8 552 aa9□□□□□ -0.97
MSH2-202ENST00000406134 ANKRD61A6NGH8 418 aa9□□□□□ -0.97
MSH2-202ENST00000406134 C2orf74A8MZ97 194 aa9□□□□□ -0.97
MSH2-202ENST00000406134 DCTN6O00399 190 aa9□□□□□ -0.97
MSH2-202ENST00000406134 OR2B3O76000 313 aa9□□□□□ -0.97
MSH2-202ENST00000406134 GIFP27352 417 aa9□□□□□ -0.97
MSH2-202ENST00000406134 PSMB10P40306 273 aa9□□□□□ -0.97
MSH2-202ENST00000406134 CDKN2AP42771 156 aaKnown RBP9□□□□□ -0.97
MSH2-202ENST00000406134 SLC16A1P53985 500 aa9□□□□□ -0.97
MSH2-202ENST00000406134 ACTC1P68032 377 aa9□□□□□ -0.97
MSH2-202ENST00000406134 ACTA1P68133 377 aa9□□□□□ -0.97
MSH2-202ENST00000406134 SIRPAP78324 504 aa9□□□□□ -0.97
MSH2-202ENST00000406134 MAB21L1Q13394 359 aa9□□□□□ -0.97
MSH2-202ENST00000406134 ZNF542PQ5EBM4 170 aa9□□□□□ -0.97
MSH2-202ENST00000406134 SLITRK4Q8IW52 837 aa9□□□□□ -0.97
MSH2-202ENST00000406134 SLC35F2Q8IXU6 374 aa9□□□□□ -0.97
MSH2-202ENST00000406134 CMTM4Q8IZR5 234 aa9□□□□□ -0.97
MSH2-202ENST00000406134 FAM98AQ8NCA5 519 aaKnown RBP9□□□□□ -0.97
MSH2-202ENST00000406134 C7orf57Q8NEG2 295 aa9□□□□□ -0.97
MSH2-202ENST00000406134 MOSPD2Q8NHP6 518 aa9□□□□□ -0.97
MSH2-202ENST00000406134 HDHD2Q9H0R4 259 aa9□□□□□ -0.97
MSH2-202ENST00000406134 RPRD1BQ9NQG5 326 aaKnown RBP9□□□□□ -0.97
MSH2-202ENST00000406134 CLEC4AQ9UMR7 237 aa9□□□□□ -0.97
MSH2-202ENST00000406134 AK6Q9Y3D8 172 aaKnown RBP9□□□□□ -0.97
MSH2-202ENST00000406134 NPTNQ9Y639 398 aa9□□□□□ -0.97
MSH2-202ENST00000406134 RNF215Q9Y6U7 377 aa9□□□□□ -0.97
MSH2-202ENST00000406134 URADA6NGE7 173 aa9□□□□□ -0.97
MSH2-202ENST00000406134 ZNF593O00488 134 aaPredicted RBP9□□□□□ -0.97
MSH2-202ENST00000406134 HPXP02790 462 aa9□□□□□ -0.97
MSH2-202ENST00000406134 OR2T7P0C7T2 308 aa9□□□□□ -0.97
MSH2-202ENST00000406134 SULT1A3P0DMM9 295 aa9□□□□□ -0.97
MSH2-202ENST00000406134 SULT1A4P0DMN0 295 aa9□□□□□ -0.97
MSH2-202ENST00000406134 GABRG2P18507 467 aa9□□□□□ -0.97
MSH2-202ENST00000406134 ADRA2CP18825 462 aa9□□□□□ -0.97
MSH2-202ENST00000406134 DIO1P49895 249 aa9□□□□□ -0.97
MSH2-202ENST00000406134 HTR4Q13639 388 aa9□□□□□ -0.97
MSH2-202ENST00000406134 ERV3-1Q14264 604 aa9□□□□□ -0.97
MSH2-202ENST00000406134 CD226Q15762 336 aa9□□□□□ -0.97
MSH2-202ENST00000406134 RNASE12Q5GAN4 147 aaKnown RBP9□□□□□ -0.97
MSH2-202ENST00000406134 APOOLQ6UXV4 268 aa9□□□□□ -0.97
MSH2-202ENST00000406134 DNM1P46Q6ZS02 220 aa9□□□□□ -0.97
MSH2-202ENST00000406134 AVL9Q8NBF6 648 aa9□□□□□ -0.97
MSH2-202ENST00000406134 OR2T27Q8NH04 317 aa9□□□□□ -0.97
MSH2-202ENST00000406134 HRASLS2Q9NWW9 162 aa9□□□□□ -0.97
MSH2-202ENST00000406134 POMT2Q9UKY4 750 aa9□□□□□ -0.97
MSH2-202ENST00000406134 SPATA2Q9UM82 520 aa9□□□□□ -0.97
MSH2-202ENST00000406134 SCML1Q9UN30 329 aa9□□□□□ -0.97
MSH2-202ENST00000406134 NCKAP1Q9Y2A7 1128 aa9□□□□□ -0.97
MSH2-202ENST00000406134 PHF3Q92576 2039 aaKnown RBP9□□□□□ -0.97
MSH2-202ENST00000406134 OR5K3A6NET4 321 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 C17orf51A8MQB3 221 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 TNFRSF10AO00220 468 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 UPK3AO75631 287 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 MT-ND4P03905 459 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 SLC6A6P31641 620 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 MAT1AQ00266 395 aaKnown RBP8.99□□□□□ -0.97
MSH2-202ENST00000406134 POU4F2Q12837 409 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 NNATQ16517 81 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 KLHL26Q53HC5 615 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 BCORP1Q8N888 145 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 SMIM4Q8WVI0 70 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 RERGQ96A58 199 aaPredicted RBP8.99□□□□□ -0.97
MSH2-202ENST00000406134 LRFN5Q96NI6 719 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 MOGAT1Q96PD6 335 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 CNN2Q99439 309 aaKnown RBP8.99□□□□□ -0.97
MSH2-202ENST00000406134 GPR174Q9BXC1 333 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 FBRSQ9HAH7 460 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 PLEKHA1Q9HB21 404 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 TMEM27Q9HBJ8 222 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 FBXL21Q9UKT6 434 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 ADAMTS9Q9P2N4 1935 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 TNRC18O15417 2968 aaPredicted RBP8.99□□□□□ -0.97
MSH2-202ENST00000406134 FAM221BA6H8Z2 402 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 LEUTXA8MZ59 168 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 ZNF749O43361 778 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 CDC123O75794 336 aaPredicted RBP8.99□□□□□ -0.97
MSH2-202ENST00000406134 ZFPL1O95159 310 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 MPC2O95563 127 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 PTH2RP49190 550 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 PER3P56645 1201 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 CAMK2DQ13557 499 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 SHHQ15465 462 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 ULK3Q6PHR2 472 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 OVCH1Q7RTY7 1134 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 SLC43A2Q8N370 569 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 ZNF321PQ8N8H1 164 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 POMGNT2Q8NAT1 580 aa8.99□□□□□ -0.97
MSH2-202ENST00000406134 C16orf52Q8NHV5 167 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms