RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 ZNF707Q96C28 371 aaPredicted RBP14.95□□□□□ -0.02
COL4A3BP-204ENST00000405807 DPEP2Q9H4A9 486 aa14.95□□□□□ -0.02
COL4A3BP-204ENST00000405807 CCDC86Q9H6F5 360 aaKnown RBP14.95□□□□□ -0.02
COL4A3BP-204ENST00000405807 PELI2Q9HAT8 420 aa14.95□□□□□ -0.02
COL4A3BP-204ENST00000405807 SEMA4GQ9NTN9 838 aa14.95□□□□□ -0.02
COL4A3BP-204ENST00000405807 CPSF4LA6NMK7 179 aaKnown RBP14.95□□□□□ -0.02
COL4A3BP-204ENST00000405807 ZNF805Q5CZA5 627 aa14.95□□□□□ -0.02
COL4A3BP-204ENST00000405807 DEGS2Q6QHC5 323 aa14.95□□□□□ -0.02
COL4A3BP-204ENST00000405807 TMEM25Q86YD3 366 aa14.95□□□□□ -0.02
COL4A3BP-204ENST00000405807 CPOQ8IVL8 374 aa14.95□□□□□ -0.02
COL4A3BP-204ENST00000405807 MISPQ8IVT2 679 aa14.95□□□□□ -0.02
COL4A3BP-204ENST00000405807 ASB16Q96NS5 453 aa14.95□□□□□ -0.02
COL4A3BP-204ENST00000405807 DDOQ99489 341 aa14.95□□□□□ -0.02
COL4A3BP-204ENST00000405807 MYOZ1Q9NP98 299 aaPredicted RBP14.95□□□□□ -0.02
COL4A3BP-204ENST00000405807 LHX9Q9NQ69 397 aa14.95□□□□□ -0.02
COL4A3BP-204ENST00000405807 ASF1AQ9Y294 204 aa14.95□□□□□ -0.02
COL4A3BP-204ENST00000405807 J3QRE1 110 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 OR4E1P0C645 316 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 SULT1A3P0DMM9 295 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 SULT1A4P0DMN0 295 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 FOLR2P14207 255 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 NCBP2P52298 156 aaKnown RBP eCLIP14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 GSG1Q2KHT4 349 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 PRSS35Q8N3Z0 413 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 SIRT6Q8N6T7 355 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 OR2T33Q8NG76 320 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 MAFIPQ8WZ33 124 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 DIO2Q92813 273 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 ALG8Q9BVK2 526 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 ZDHHC5Q9C0B5 715 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 TRIM36Q9NQ86 728 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 PRDM7Q9NQW5 492 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 ADAM29Q9UKF5 820 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 PLAGL1Q9UM63 463 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 SIRT4Q9Y6E7 314 aaPredicted RBP14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 SOCS6O14544 535 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 IFNA2P01563 188 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 DRD2P14416 443 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 PITPNAQ00169 270 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 MPPED2Q15777 294 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 DECR1Q16698 335 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 TCTN1Q2MV58 587 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 POM121L1PQ3SYA9 428 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 SLC35D3Q5M8T2 416 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 PIP5KL1Q5T9C9 394 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 PRAMEF8Q5VWM4 474 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 PRAMEF7Q5VXH5 474 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 CST9Q5W186 159 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 FGD2Q7Z6J4 655 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 GID4Q8IVV7 300 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 ACOT11Q8WXI4 607 aaPredicted RBP14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 MYLIPQ8WY64 445 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 WNT2BQ93097 391 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 ARHGDIGQ99819 225 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 METTL17Q9H7H0 456 aaPredicted RBP14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 IL36AQ9UHA7 158 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 TAC3Q9UHF0 121 aa14.94□□□□□ -0.02
COL4A3BP-204ENST00000405807 PLXND1Q9Y4D7 1925 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 NDUFS4O43181 175 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 SSNA1O43805 119 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 DIRAS3O95661 229 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 CRHP06850 196 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 SLC2A1P11166 492 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 NTSP30990 170 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 TRA2BP62995 288 aaKnown RBP14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 FUT5Q11128 374 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 C1orf185Q5T7R7 199 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 B3GNTL1Q67FW5 361 aaPredicted RBP14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 BAIAP2L2Q6UXY1 529 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 CXXC5Q7LFL8 322 aaKnown RBP14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 SIAH3Q8IW03 269 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 OR5W2Q8NH69 310 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 TCEAL4Q96EI5 215 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 HINT3Q9NQE9 182 aaKnown RBP14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 CKAP5Q14008 2032 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 RFXAPO00287 272 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 SLC2A10O95528 541 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 UGT2B7P16662 529 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 CCR8P51685 355 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 TAS2R38P59533 333 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 FOXK1P85037 733 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 LASP1Q14847 261 aaKnown RBP14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 TMEM64Q6YI46 380 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 ZNF620Q6ZNG0 422 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 ADIPOR2Q86V24 386 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 PXT1Q8NFP0 134 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 OR5M9Q8NGP3 310 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 DZANK1Q9NVP4 752 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 SAGE1Q9NXZ1 904 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 NLGN3Q9NZ94 848 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 KCNIP3Q9Y2W7 256 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 KIF26AQ9ULI4 1882 aaPredicted RBP14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 FEZF1A0PJY2 475 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 GSAPA4D1B5 854 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 TMEM88BA6NKF7 163 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 HSBP1L1C9JCN9 74 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 PPIHO43447 177 aaKnown RBP14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 FRS3O43559 492 aa14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 HMGN2P05204 90 aaKnown RBP14.93□□□□□ -0.02
COL4A3BP-204ENST00000405807 CTSLP07711 333 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms