RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 TNFRSF10DQ9UBN6 386 aa11.05□□□□□ -0.64
LINC00339-201ENST00000404210 ZNF229Q9UJW7 825 aa11.05□□□□□ -0.64
LINC00339-201ENST00000404210 CAMK2AQ9UQM7 478 aa11.05□□□□□ -0.64
LINC00339-201ENST00000404210 CORINQ9Y5Q5 1042 aa11.05□□□□□ -0.64
LINC00339-201ENST00000404210 PIEZO2Q9H5I5 2752 aa11.05□□□□□ -0.64
LINC00339-201ENST00000404210 B8ZZF3 427 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 KLF4O43474 513 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 CXCL13O43927 109 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 WDR1O75083 606 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 HIST1H2ABP04908 130 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 ASAH2BP0C7U1 165 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 GABRA1P14867 456 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 ABOP16442 354 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 MAKP20794 623 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 PTNP21246 168 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 PRKACGP22612 351 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 CBLP22681 906 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 PTGER4P35408 488 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 EIF1AXP47813 144 aaKnown RBP11.04□□□□□ -0.64
LINC00339-201ENST00000404210 GSSP48637 474 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 SLC9A3P48764 834 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 NUP107P57740 925 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 H3F3AP84243 136 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 COX10Q12887 443 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 TSPAN31Q12999 210 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 LAPTM4AQ15012 233 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 ZNF239Q16600 458 aaKnown RBP11.04□□□□□ -0.64
LINC00339-201ENST00000404210 SOWAHCQ53LP3 525 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-201ENST00000404210 CD300LDQ6UXZ3 194 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 H1FNTQ75WM6 255 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-201ENST00000404210 HIST3H2AQ7L7L0 130 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 SLC46A3Q7Z3Q1 461 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 ADGRE4PQ86SQ3 457 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 STK32CQ86UX6 486 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 HS3ST5Q8IZT8 346 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 C10orf53Q8N6V4 93 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 SCAIQ8N9R8 606 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 OR9Q2Q8NGE9 314 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 HIST1H2ACQ93077 130 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 SDCCAG3Q96C92 435 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 ZHX1-C8orf76Q96EF9 292 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 FAM46AQ96IP4 442 aaKnown RBP11.04□□□□□ -0.64
LINC00339-201ENST00000404210 MOGAT1Q96PD6 335 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 FEVQ99581 238 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 ASPNQ9BXN1 380 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 GABARAPL1Q9H0R8 117 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 ALKBH4Q9NXW9 302 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 MRPL39Q9NYK5 338 aaKnown RBP11.04□□□□□ -0.64
LINC00339-201ENST00000404210 NKX1-2Q9UD57 310 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-201ENST00000404210 OAZ3Q9UMX2 235 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 MAGED1Q9Y5V3 778 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-201ENST00000404210 ZZEF1O43149 2961 aa11.04□□□□□ -0.64
LINC00339-201ENST00000404210 ZGRF1Q86YA3 2104 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 SAC3D1A6NKF1 404 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 EFCAB9A8MZ26 197 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 LRRN3E7EW58 273 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 PRRG2O14669 202 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 CASQ2O14958 399 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-201ENST00000404210 ZNHIT1O43257 154 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 PTP4A3O75365 173 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 SYNGR4O95473 234 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 ATP6V1G2O95670 118 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 ADAP00813 363 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 TPOP07202 933 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 TSPAN19P0C672 248 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 GSTM3P21266 225 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 ENPP1P22413 925 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 FPR3P25089 353 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 GTF2E2P29084 291 aaKnown RBP11.03□□□□□ -0.64
LINC00339-201ENST00000404210 GRPRP30550 384 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 DAPP51397 102 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 C19orf57Q0VDD7 668 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 ZP4Q12836 540 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 ZBED5Q49AG3 693 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 EMC4Q5J8M3 183 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 FAHD1Q6P587 224 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 PAQR6Q6TCH4 344 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 LSRQ86X29 649 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-201ENST00000404210 LRRC17Q8N6Y2 441 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 AQP11Q8NBQ7 271 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 ADPRHL1Q8NDY3 354 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 OR5J2Q8NH18 312 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 DNAJC9Q8WXX5 260 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 RELTQ969Z4 430 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 DNAJA3Q96EY1 480 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 ZNF845Q96IR2 970 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-201ENST00000404210 GPA33Q99795 319 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 TUBA1CQ9BQE3 449 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 SRXN1Q9BYN0 137 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 CALHM2Q9HA72 323 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 ZNF556Q9HAH1 456 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 PNPLA3Q9NST1 481 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 MCTS1Q9ULC4 181 aaKnown RBP11.03□□□□□ -0.64
LINC00339-201ENST00000404210 B3GALT5Q9Y2C3 310 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 ZNF175Q9Y473 711 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 BSNQ9UPA5 3926 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 SHANK1Q9Y566 2161 aa11.03□□□□□ -0.64
LINC00339-201ENST00000404210 LOC102725191A0A1B0GVB3 256 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 UNC119BA6NIH7 251 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 FIGNL2A6NMB9 653 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms