RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 C18orf12Q96KH6 178 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 ZNF607Q96SK3 696 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 SF3B5Q9BWJ5 86 aaKnown RBP11.73□□□□□ -0.53
SDF4-203ENST00000403997 GSX2Q9BZM3 304 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 IKZF5Q9H5V7 419 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 LAMP3Q9UQV4 416 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 NDUFAF1Q9Y375 327 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 GMEB1Q9Y692 573 aa11.73□□□□□ -0.53
SDF4-203ENST00000403997 A0A0G2JND7 137 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 AQP7P3A6NL99 342 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 ELOA3DA6NLF2 546 aaPredicted RBP11.72□□□□□ -0.53
SDF4-203ENST00000403997 SASH3O75995 380 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 AHSA1O95433 338 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 FOXG1P55316 489 aaPredicted RBP11.72□□□□□ -0.53
SDF4-203ENST00000403997 ELOA3BQ3SY89 546 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 ZNF672Q499Z4 452 aaPredicted RBP11.72□□□□□ -0.53
SDF4-203ENST00000403997 RUNDC3AQ59EK9 446 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 OR7E24Q6IFN5 339 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 DHRS4L2Q6PKH6 230 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 KBTBD8Q8NFY9 601 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 ELOA3Q8NG57 546 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 IGFBPL1Q8WX77 278 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 FBXW5Q969U6 566 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 SLC25A36Q96CQ1 311 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 Q96MF0 132 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 MUS81Q96NY9 551 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 CPPED1Q9BRF8 314 aaPredicted RBP11.72□□□□□ -0.53
SDF4-203ENST00000403997 RSPO3Q9BXY4 272 aaPredicted RBP11.72□□□□□ -0.53
SDF4-203ENST00000403997 TMEM38AQ9H6F2 299 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 SLC7A10Q9NS82 523 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 MALT1Q9UDY8 824 aa11.72□□□□□ -0.53
SDF4-203ENST00000403997 RAI1Q7Z5J4 1906 aaPredicted RBP11.72□□□□□ -0.53
SDF4-203ENST00000403997 A0A1W2PR80 420 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 PRORSD1PA6NEY8 169 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 TMEM229AB2RXF0 380 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 ANGPT2O15123 496 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 TPST1O60507 370 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 TMCC2O75069 709 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 NPIPB7O75200 414 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 SERPINB7O75635 380 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 KRT33AO76009 404 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 ITGA5P08648 1049 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 INHBBP09529 407 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 AQP1P29972 269 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 RPS5P46782 204 aaKnown RBP11.71□□□□□ -0.53
SDF4-203ENST00000403997 ZNF83P51522 516 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 ATP5J2P56134 94 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 RPS4XP62701 263 aaKnown RBP11.71□□□□□ -0.53
SDF4-203ENST00000403997 TGFBR3Q03167 851 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 ADRM1Q16186 407 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 GABRA6Q16445 453 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 TSPO2Q5TGU0 170 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 DHDDSQ86SQ9 333 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 BIVMQ86UB2 503 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 COMTD1Q86VU5 262 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 ZIC4Q8N9L1 334 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 HIPK4Q8NE63 616 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 MFSD8Q8NHS3 518 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 RNF217Q8TC41 542 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 SMAP2Q8WU79 429 aaPredicted RBP11.71□□□□□ -0.53
SDF4-203ENST00000403997 TMEM45BQ96B21 275 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 KTI12Q96EK9 354 aaPredicted RBP11.71□□□□□ -0.53
SDF4-203ENST00000403997 ZNF385AQ96PM9 386 aaKnown RBP11.71□□□□□ -0.53
SDF4-203ENST00000403997 SMR3AQ99954 134 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 SIKE1Q9BRV8 207 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 BDH2Q9BUT1 245 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 PRR14Q9BWN1 585 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 C1QTNF6Q9BXI9 259 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 SLCO5A1Q9H2Y9 848 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 PIF1Q9H611 641 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 ZNF385DQ9H6B1 395 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 ZNF701Q9NV72 531 aaPredicted RBP11.71□□□□□ -0.53
SDF4-203ENST00000403997 NPAP1Q9NZP6 1156 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 SLC13A4Q9UKG4 626 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 ANGPT4Q9Y264 503 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 RASD1Q9Y272 281 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 SLC25A15Q9Y619 301 aa11.71□□□□□ -0.53
SDF4-203ENST00000403997 FLNAP21333 2647 aaKnown RBP11.71□□□□□ -0.54
SDF4-203ENST00000403997 A0A1B0GWA3 101 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 H7C1Q1 480 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 PDLIM1O00151 329 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 ABCD4O14678 606 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 VAMP5O95183 116 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 SOD3P08294 240 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 PAX1P15863 534 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 CDH2P19022 906 aaPredicted RBP11.7□□□□□ -0.54
SDF4-203ENST00000403997 HTR2AP28223 471 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 GTF2E2P29084 291 aaKnown RBP11.7□□□□□ -0.54
SDF4-203ENST00000403997 MPGP29372 298 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 P2RY4P51582 365 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 NCALDP61601 193 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 NFYCQ13952 458 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 CYP51A1Q16850 503 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 GLIPR1L2Q4G1C9 344 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 METTL21CQ5VZV1 264 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 KLHL17Q6TDP4 642 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 C6orf89Q6UWU4 347 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 TMEM108Q6UXF1 575 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 CREB3L2Q70SY1 520 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 RETREG3Q86VR2 466 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms