RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CMTM4Q8IZR5 234 aa18.21■□□□□ 0.51
CCDC47-202ENST00000403162 SPEM1Q8N4L4 309 aa18.21■□□□□ 0.51
CCDC47-202ENST00000403162 OR11G2Q8NGC1 345 aa18.21■□□□□ 0.51
CCDC47-202ENST00000403162 OR2T35Q8NGX2 323 aa18.21■□□□□ 0.51
CCDC47-202ENST00000403162 ZCCHC10Q8TBK6 192 aa18.21■□□□□ 0.51
CCDC47-202ENST00000403162 GRHL3Q8TE85 626 aa18.21■□□□□ 0.51
CCDC47-202ENST00000403162 CNN2Q99439 309 aaKnown RBP18.21■□□□□ 0.51
CCDC47-202ENST00000403162 NANSQ9NR45 359 aa18.21■□□□□ 0.51
CCDC47-202ENST00000403162 POLE3Q9NRF9 147 aa18.21■□□□□ 0.51
CCDC47-202ENST00000403162 AK6Q9Y3D8 172 aaKnown RBP18.21■□□□□ 0.51
CCDC47-202ENST00000403162 DNAJB6O75190 326 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 LCN1P31025 176 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 MAT2AP31153 395 aaKnown RBP18.2■□□□□ 0.5
CCDC47-202ENST00000403162 CCR9P51686 369 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 HCCSP53701 268 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 ELFN2Q5R3F8 820 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 GLRX5Q86SX6 157 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 ZMYND19Q96E35 227 aaPredicted RBP18.2■□□□□ 0.5
CCDC47-202ENST00000403162 OR14A2Q96R54 314 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 TTTY10Q9BZA0 68 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 FLRT3Q9NZU0 649 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 NAP1L6A6NFF2 107 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 ZNF879B4DU55 563 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 P2RX6O15547 441 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 ECDO95905 644 aaPredicted RBP18.2■□□□□ 0.5
CCDC47-202ENST00000403162 IGFALSP35858 605 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 SELENOPP49908 381 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 VSX2P58304 361 aaPredicted RBP18.2■□□□□ 0.5
CCDC47-202ENST00000403162 FIGNL1Q6PIW4 674 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 ARL14Q8N4G2 192 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 FAM71CQ8NEG0 241 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 SCARF2Q96GP6 870 aaPredicted RBP18.2■□□□□ 0.5
CCDC47-202ENST00000403162 LCORQ96JN0 433 aaPredicted RBP18.2■□□□□ 0.5
CCDC47-202ENST00000403162 ERMAPQ96PL5 475 aaPredicted RBP18.2■□□□□ 0.5
CCDC47-202ENST00000403162 OR2A5Q96R48 311 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 METTL17Q9H7H0 456 aaPredicted RBP18.2■□□□□ 0.5
CCDC47-202ENST00000403162 HRASLSQ9HDD0 168 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 CHRNA9Q9UGM1 479 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 CYP8B1Q9UNU6 501 aa18.2■□□□□ 0.5
CCDC47-202ENST00000403162 VCANP13611 3396 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 TRBV2A0A0J9YWF9 115 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 A0A1B0GWA3 101 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 URADA6NGE7 173 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 RRASP10301 218 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 PPP2CBP62714 309 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 PPP2CAP67775 309 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 POU6F2P78424 691 aaPredicted RBP18.19■□□□□ 0.5
CCDC47-202ENST00000403162 ID2Q02363 134 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 SIGLEC14Q08ET2 396 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 AANATQ16613 207 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 METTL11BQ5VVY1 283 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 MTFR2Q6P444 385 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 FAM199XQ6PEV8 388 aaPredicted RBP18.19■□□□□ 0.5
CCDC47-202ENST00000403162 SLC35F2Q8IXU6 374 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 IZUMO1Q8IYV9 350 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 OR52E2Q8NGJ4 325 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 OMA1Q96E52 524 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 TPSD1Q9BZJ3 242 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 MAB21L2Q9Y586 359 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 FKBP7Q9Y680 259 aa18.19■□□□□ 0.5
CCDC47-202ENST00000403162 A0A1B0GUH1 482 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 TUBAL3A6NHL2 446 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 LRRC72A6NJI9 287 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 MAGEB4O15481 346 aaPredicted RBP18.18■□□□□ 0.5
CCDC47-202ENST00000403162 GPRIN2O60269 458 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 GMDSO60547 372 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 TMEM127O75204 238 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 PDGFBP01127 241 aaPredicted RBP18.18■□□□□ 0.5
CCDC47-202ENST00000403162 NGFRP08138 427 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 PSMB1P20618 241 aaKnown RBP18.18■□□□□ 0.5
CCDC47-202ENST00000403162 ZNF10P21506 573 aaPredicted RBP18.18■□□□□ 0.5
CCDC47-202ENST00000403162 AP3S2P59780 193 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 LINGO2Q7L985 606 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 EID2Q8N6I1 236 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 UXS1Q8NBZ7 420 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 CEP76Q8TAP6 659 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 DOK4Q8TEW6 326 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 CNOT9Q92600 299 aaKnown RBP18.18■□□□□ 0.5
CCDC47-202ENST00000403162 SLC22A18Q96BI1 424 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 CLIP3Q96DZ5 547 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 DERL3Q96Q80 235 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 SMAD5Q99717 465 aaKnown RBP18.18■□□□□ 0.5
CCDC47-202ENST00000403162 APOOQ9BUR5 198 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 SLC17A9Q9BYT1 436 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 LYRM4Q9HD34 91 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 TMEM74BQ9NUR3 256 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 RCE1Q9Y256 329 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 CIB4A0PJX0 185 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 SYNDIG1LA6NDD5 238 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 GABARAPH6UMI1 98 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 OR7A10O76100 309 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 APBB3O95704 486 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 ADRB1P08588 477 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 IFI6P09912 130 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 ZNF250P15622 560 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 POLR2CP19387 275 aaPredicted RBP18.18■□□□□ 0.5
CCDC47-202ENST00000403162 SDHBP21912 280 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 EDNRAP25101 427 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 BLVRAP53004 296 aa18.18■□□□□ 0.5
CCDC47-202ENST00000403162 RAB14P61106 215 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms