RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 STMND1H3BQB6 276 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 ARPC3O15145 178 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 FOXF1Q12946 379 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 SNTA1Q13424 505 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 MED22Q15528 200 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 MEPCEQ7L2J0 689 aaKnown RBP23.22■■□□□ 1.31
CPNE1-205ENST00000401607 CYB561A3Q8NBI2 242 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 OR2M3Q8NG83 312 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 OR52E2Q8NGJ4 325 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 STK35Q8TDR2 534 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 KISS1RQ969F8 398 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-205ENST00000401607 DNAJA3Q96EY1 480 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 FRMD6Q96NE9 622 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 SECISBP2Q96T21 854 aaKnown RBP23.22■■□□□ 1.31
CPNE1-205ENST00000401607 KATNB1Q9BVA0 655 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 GPN2Q9H9Y4 310 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-205ENST00000401607 SH2D2AQ9NP31 389 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 IFNGP01579 166 aa23.21■■□□□ 1.31
CPNE1-205ENST00000401607 CD36P16671 472 aa23.21■■□□□ 1.31
CPNE1-205ENST00000401607 ETV1P50549 477 aa23.21■■□□□ 1.31
CPNE1-205ENST00000401607 AQP6Q13520 282 aa23.21■■□□□ 1.31
CPNE1-205ENST00000401607 ANKDD1AQ495B1 522 aa23.21■■□□□ 1.31
CPNE1-205ENST00000401607 ARMCX4Q5H9R4 360 aa23.21■■□□□ 1.31
CPNE1-205ENST00000401607 H3F3CQ6NXT2 135 aa23.21■■□□□ 1.31
CPNE1-205ENST00000401607 P2RY8Q86VZ1 359 aa23.21■■□□□ 1.31
CPNE1-205ENST00000401607 DND1Q8IYX4 353 aaKnown RBP23.21■■□□□ 1.31
CPNE1-205ENST00000401607 WDSUB1Q8N9V3 476 aa23.21■■□□□ 1.31
CPNE1-205ENST00000401607 PROKR2Q8NFJ6 384 aa23.21■■□□□ 1.31
CPNE1-205ENST00000401607 OR4F15Q8NGB8 312 aa23.21■■□□□ 1.31
CPNE1-205ENST00000401607 OR4K13Q8NH42 304 aa23.21■■□□□ 1.31
CPNE1-205ENST00000401607 NTNG2Q96CW9 530 aa23.21■■□□□ 1.31
CPNE1-205ENST00000401607 MND1Q9BWT6 205 aa23.21■■□□□ 1.31
CPNE1-205ENST00000401607 OR11A1Q9GZK7 315 aa23.21■■□□□ 1.31
CPNE1-205ENST00000401607 A0A1W2PPW3 197 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 CCDC182A6NF36 153 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 SERPINA7P05543 415 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 CCL3P10147 92 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 SLC2A5P22732 501 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 ERVK-25P63136 954 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 RPL18Q07020 188 aaKnown RBP23.2■■□□□ 1.3
CPNE1-205ENST00000401607 PLPPR5Q32ZL2 321 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 ALG10Q5BKT4 473 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 C1orf140Q5VVS0 124 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 B3GLCTQ6Y288 498 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 NANOGNBQ7Z5D8 188 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 FADS6Q8N9I5 356 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 SDR9C7Q8NEX9 313 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 PAQR8Q8TEZ7 354 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 FAM117AQ9C073 453 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 KLHL1Q9NR64 748 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 KLHL21Q9UJP4 597 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 FBXL2Q9UKC9 423 aa23.2■■□□□ 1.3
CPNE1-205ENST00000401607 CLUP10909 449 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 GABREP78334 506 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.19■■□□□ 1.3
CPNE1-205ENST00000401607 LSAMPQ13449 338 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 SLC25A53Q5H9E4 307 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 FAM69AQ5T7M9 428 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 ZNF468Q5VIY5 522 aaPredicted RBP23.19■■□□□ 1.3
CPNE1-205ENST00000401607 TMEM156Q8N614 296 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 MGLLQ99685 303 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 DCUN1D5Q9BTE7 237 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 MT-ATP6P00846 226 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 CD14P08571 375 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 HSMCR30P0CW71 290 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 APOBEC1P41238 236 aaKnown RBP23.19■■□□□ 1.3
CPNE1-205ENST00000401607 LIMK1P53667 647 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 ATP1A4Q13733 1029 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 B3GNTL1Q67FW5 361 aaPredicted RBP23.19■■□□□ 1.3
CPNE1-205ENST00000401607 FAM122BQ7Z309 247 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 TMPRSS12Q86WS5 348 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 SIRT6Q8N6T7 355 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 FAM98AQ8NCA5 519 aaKnown RBP23.19■■□□□ 1.3
CPNE1-205ENST00000401607 POC1BQ8TC44 478 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 ADAMTS17Q8TE56 1095 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 DDOQ99489 341 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 BCL7BQ9BQE9 202 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 ANGPTL4Q9BY76 406 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 IRF2BPLQ9H1B7 796 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 PROK2Q9HC23 129 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 SEC14L4Q9UDX3 406 aa23.19■■□□□ 1.3
CPNE1-205ENST00000401607 SHISA8B8ZZ34 492 aa23.18■■□□□ 1.3
CPNE1-205ENST00000401607 J3QRE1 110 aa23.18■■□□□ 1.3
CPNE1-205ENST00000401607 MYL12BO14950 172 aa23.18■■□□□ 1.3
CPNE1-205ENST00000401607 IDH3BO43837 385 aa23.18■■□□□ 1.3
CPNE1-205ENST00000401607 MYL12AP19105 171 aa23.18■■□□□ 1.3
CPNE1-205ENST00000401607 ZNF41P51814 821 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-205ENST00000401607 NFATC3Q12968 1075 aa23.18■■□□□ 1.3
CPNE1-205ENST00000401607 SPHARQ15513 63 aa23.18■■□□□ 1.3
CPNE1-205ENST00000401607 KLHL12Q53G59 568 aa23.18■■□□□ 1.3
CPNE1-205ENST00000401607 C5orf46Q6UWT4 87 aa23.18■■□□□ 1.3
CPNE1-205ENST00000401607 NKD1Q969G9 470 aa23.18■■□□□ 1.3
CPNE1-205ENST00000401607 RASD2Q96D21 266 aa23.18■■□□□ 1.3
CPNE1-205ENST00000401607 OPALINQ96PE5 141 aa23.18■■□□□ 1.3
CPNE1-205ENST00000401607 OR51V1Q9H2C8 321 aa23.18■■□□□ 1.3
CPNE1-205ENST00000401607 RYDENQ9NUL5 291 aaKnown RBP23.18■■□□□ 1.3
CPNE1-205ENST00000401607 HPF1Q9NWY4 346 aa23.18■■□□□ 1.3
CPNE1-205ENST00000401607 IL17BQ9UHF5 180 aa23.18■■□□□ 1.3
CPNE1-205ENST00000401607 SLC6A5Q9Y345 797 aa23.18■■□□□ 1.3
CPNE1-205ENST00000401607 EXOSC1Q9Y3B2 195 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms