RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 PODNL1Q6PEZ8 512 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 CEACAM19Q7Z692 300 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 PDZD3Q86UT5 571 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 UBL7Q96S82 380 aaPredicted RBP10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 NPY6RQ99463 290 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 MTHFD2LQ9H903 347 aaPredicted RBP10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 BLACEA4D250 179 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 LRP5LA4QPB2 252 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 HLA-DOBP13765 273 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 DNASE1P24855 282 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 KEAP1Q14145 624 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 TRIP6Q15654 476 aaKnown RBP10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 ATP6AP1Q15904 470 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 MAMSTRQ6ZN01 415 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 YRDCQ86U90 279 aaKnown RBP10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 BAGE3Q86Y29 109 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 BAGE2Q86Y30 109 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 SPARTQ8N0X7 666 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 OR5AK2Q8NH90 309 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 CNTNAP3BQ96NU0 1288 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 SUSD5O60279 629 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 GFRA3O60609 400 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 RBBP9O75884 186 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 SEC14L2O76054 403 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 MBP02144 154 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 RD3LP0DJH9 198 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 SLC25A11Q02978 314 aaKnown RBP10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 SOX4Q06945 474 aaPredicted RBP10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 PLA1AQ53H76 456 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 BEX5Q5H9J7 111 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 LCN10Q6JVE6 187 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 TMEM130Q8N3G9 435 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 KRTCAP2Q8N6L1 136 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 WDR31Q8NA23 367 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 OR13H1Q8NG92 308 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 OR1M1Q8NGA1 313 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 OR4Q3Q8NH05 313 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 ABHD4Q8TB40 342 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 LCORQ96JN0 433 aaPredicted RBP10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 MMP27Q9H306 513 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 SLC2A9Q9NRM0 540 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 INIPQ9NRY2 104 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 CCM2LQ9NUG4 571 aaPredicted RBP10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 ARMC1Q9NVT9 282 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 MARCH4Q9P2E8 410 aaPredicted RBP10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 ACTL7AQ9Y615 435 aa10.23□□□□□ -0.77
CACNA1C-216ENST00000399638 TJP1Q07157 1748 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 KDM4EB2RXH2 506 aaPredicted RBP10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 NRG2O14511 850 aaPredicted RBP10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 SFRP4Q6FHJ7 346 aaPredicted RBP10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 LRR1Q96L50 414 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 ZNF583Q96ND8 569 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 SLC35A3Q9Y2D2 325 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 CEPT1Q9Y6K0 416 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 CCDC187A0A096LP49 1063 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 A0A1W2PP18 115 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 MAGEB4O15481 346 aaPredicted RBP10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 CREG1O75629 220 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 UGT2B7P16662 529 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 HOXD12P35452 270 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 RFC3P40938 356 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 HK3P52790 923 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 AKR1C1Q04828 323 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 GGNBP1Q5YKI7 109 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 TMEM65Q6PI78 240 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 C1orf210Q8IVY1 113 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 ZNF384Q8TF68 577 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 DUSP19Q8WTR2 217 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 ELSPBP1Q96BH3 223 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 DCSTAMPQ9H295 470 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 DUSP22Q9NRW4 184 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 UFSP2Q9NUQ7 469 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 C17orf113A0A1B0GUU1 675 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 FCGR2AP12318 317 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 PRKACGP22612 351 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 MAB21L1Q13394 359 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 PAFAH1B3Q15102 231 aaKnown RBP10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 AVPI1Q5T686 147 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 ADGRF3Q8IZF5 1079 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 C14orf119Q9NWQ9 140 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 HCSTQ9UBK5 93 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 HOXA11P31270 313 aaPredicted RBP10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 SOX18P35713 384 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 DUSP2Q05923 314 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 RABL3Q5HYI8 236 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 TMEM211Q6ICI0 200 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 HSD11B1LQ7Z5J1 315 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 ZCCHC14Q8WYQ9 949 aaKnown RBP10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 SIGLEC10Q96LC7 697 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 ZDHHC2Q9UIJ5 367 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 SCN11AQ9UI33 1791 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 IGHV3-20A0A0C4DH32 117 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 LINC01565O15544 149 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 ZNF623O75123 536 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 SFTPCP11686 197 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 PRPS1P60891 318 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 RAB32Q13637 225 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 DPPA4Q7L190 304 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 OR2M7Q8NG81 312 aa10.22□□□□□ -0.77
CACNA1C-216ENST00000399638 ARL6Q9H0F7 186 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms