RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 RPL13AP3Q6NVV1 102 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 LINC00114Q6XXX2 140 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 LINC00518Q8N0U6 118 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 CELF2-AS1Q8N7Q2 184 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 ATP6V1C2Q8NEY4 427 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 OR52E2Q8NGJ4 325 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 SLC2A12Q8TD20 617 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 C3orf49Q96BT1 292 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 ZNF524Q96C55 264 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 ZNF578Q96N58 590 aaPredicted RBP10.77□□□□□ -0.69
COL25A1-202ENST00000399127 DPYSL5Q9BPU6 564 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 KATNB1Q9BVA0 655 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 SLC35A3Q9Y2D2 325 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 SIRT4Q9Y6E7 314 aaPredicted RBP10.77□□□□□ -0.69
COL25A1-202ENST00000399127 A0A075B6Q4 140 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 SAGE2PA6NJ88 616 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 HIST1H1CP16403 213 aaKnown RBP10.77□□□□□ -0.69
COL25A1-202ENST00000399127 ZNF3P17036 446 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 FBLP22087 321 aaKnown RBP10.77□□□□□ -0.69
COL25A1-202ENST00000399127 RPL4P36578 427 aaKnown RBP10.77□□□□□ -0.69
COL25A1-202ENST00000399127 RBM34P42696 430 aaKnown RBP10.77□□□□□ -0.69
COL25A1-202ENST00000399127 ARRB1P49407 418 aaPredicted RBP10.77□□□□□ -0.69
COL25A1-202ENST00000399127 PSMD4P55036 377 aaKnown RBP10.77□□□□□ -0.69
COL25A1-202ENST00000399127 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.77□□□□□ -0.69
COL25A1-202ENST00000399127 ARHGAP40Q5TG30 622 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 PMS2CLQ68D20 193 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 VASNQ6EMK4 673 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 ZNF544Q6NX49 715 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 TMPRSS9Q7Z410 1059 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 RFLNBQ8N5W9 214 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 FAM98AQ8NCA5 519 aaKnown RBP10.77□□□□□ -0.69
COL25A1-202ENST00000399127 IL17RDQ8NFM7 739 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 ASB15Q8WXK1 588 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 SNAPC3Q92966 411 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 RELTQ969Z4 430 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 ELF4Q99607 663 aaPredicted RBP10.77□□□□□ -0.69
COL25A1-202ENST00000399127 SDHCQ99643 169 aaPredicted RBP10.77□□□□□ -0.69
COL25A1-202ENST00000399127 TIMP4Q99727 224 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 MESP1Q9BRJ9 268 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 MKKSQ9NPJ1 570 aaPredicted RBP10.77□□□□□ -0.69
COL25A1-202ENST00000399127 PRMT8Q9NR22 394 aaPredicted RBP10.77□□□□□ -0.69
COL25A1-202ENST00000399127 FGF21Q9NSA1 209 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 ACOXLQ9NUZ1 547 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 MKL2Q9ULH7 1088 aa10.77□□□□□ -0.69
COL25A1-202ENST00000399127 ALPK2Q86TB3 2170 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 CCDC163A0A0D9SF12 145 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 CCDC182A6NF36 153 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 MAGEB4O15481 346 aaPredicted RBP10.76□□□□□ -0.69
COL25A1-202ENST00000399127 DDAH2O95865 285 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 PEPDP12955 493 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 HOXA6P31267 233 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 SLC6A6P31641 620 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 ZNF181Q2M3W8 571 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 SPATC1Q76KD6 591 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 MARCH9Q86YJ5 346 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 OR8H2Q8N162 312 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 D2HGDHQ8N465 521 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 GALNT11Q8NCW6 608 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 CCDC74AQ96AQ1 378 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 ZMYND19Q96E35 227 aaPredicted RBP10.76□□□□□ -0.69
COL25A1-202ENST00000399127 SGTBQ96EQ0 304 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 NUDT9Q9BW91 350 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 RTN4RQ9BZR6 473 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 CHRNA10Q9GZZ6 450 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 ERVMER34-1Q9H9K5 563 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 ABCB9Q9NP78 766 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 KLHL1Q9NR64 748 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 UBQLN4Q9NRR5 601 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 CTSFQ9UBX1 484 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 PLEKHB1Q9UF11 243 aaPredicted RBP10.76□□□□□ -0.69
COL25A1-202ENST00000399127 IER3IP1Q9Y5U9 82 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 A0A087WUJ7 227 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 SHISA3A0PJX4 238 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 CPED1A4D0V7 1026 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 SLC22A31A6NKX4 558 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 C4orf47A7E2U8 309 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 EFCAB7A8K855 629 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 E9PI62 339 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 GTPBP1O00178 669 aaKnown RBP10.76□□□□□ -0.69
COL25A1-202ENST00000399127 SCDO00767 359 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 TSPAN4O14817 238 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 CASKO14936 926 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 NOS1APO75052 506 aaPredicted RBP10.76□□□□□ -0.69
COL25A1-202ENST00000399127 SNX4O95219 450 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 UTS2O95399 124 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 PTTG1O95997 202 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 IL1AP01583 271 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 HK1P19367 917 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 RORAP35398 523 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 SHBQ15464 509 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 LPAL2Q16609 132 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 POMZP3Q6PJE2 187 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 RPTNQ6XPR3 784 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 TMPRSS11AQ6ZMR5 421 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 LANCL3Q6ZV70 420 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 MAML2Q8IZL2 1156 aaPredicted RBP10.76□□□□□ -0.69
COL25A1-202ENST00000399127 C10orf53Q8N6V4 93 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 OR52N1Q8NH53 320 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 ZNF721Q8TF20 911 aa10.76□□□□□ -0.69
COL25A1-202ENST00000399127 ST6GAL2Q96JF0 529 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms