RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 PIAS3Q9Y6X2 628 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 ARPC1BO15143 372 aaKnown RBP4.56□□□□□ -1.68
SMAD4-202ENST00000398417 TRIM3O75382 744 aaPredicted RBP4.56□□□□□ -1.68
SMAD4-202ENST00000398417 SLC43A1O75387 559 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 NDUFB2O95178 105 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 CT62P0C5K7 136 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 OR8G3PP0DMU2 310 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 F8A1P23610 371 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 SULT1A2P50226 295 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 BTG2P78543 158 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 CDK10Q15131 360 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 ARHGAP11BQ3KRB8 267 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 ALG10BQ5I7T1 473 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 FAM27D1Q5T7N8 215 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 PYHIN1Q6K0P9 492 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 Q6ZSR6 202 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 VASH1Q7L8A9 365 aaPredicted RBP4.56□□□□□ -1.68
SMAD4-202ENST00000398417 OR4N2Q8NGD1 307 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 MMABQ96EY8 250 aaPredicted RBP4.56□□□□□ -1.68
SMAD4-202ENST00000398417 BMFQ96LC9 184 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 HHIPQ96QV1 700 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 SLC5A7Q9GZV3 580 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 CDCP1Q9H5V8 836 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 RALGAPA1Q6GYQ0 2036 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 MEIS3P1A6NDR6 274 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 CLDN4O14493 209 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 CDC42EP2O14613 210 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 IMPA2O14732 288 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 SCO2O43819 266 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 RAB38P57729 211 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 OR10A3P58181 314 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 AADACL4Q5VUY2 407 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 SFXN4Q6P4A7 337 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF627Q7L945 461 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 MEIOBQ8N635 442 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF511Q8NB15 262 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 TMEM138Q9NPI0 162 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 POT1Q9NUX5 634 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 TRBV2A0A0J9YWF9 115 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 SEMA7AO75326 666 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 TBXA2RP21731 343 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 PRKAR1BP31321 381 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 AQP2P41181 271 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 GPR50Q13585 617 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF658BQ4V348 819 aaPredicted RBP4.56□□□□□ -1.68
SMAD4-202ENST00000398417 SIAH3Q8IW03 269 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 OR8S1Q8NH09 359 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 FAM3CQ92520 227 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 RSC1A1Q92681 617 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 FGF14Q92915 247 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 C5orf34Q96MH7 638 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 WDFY2Q96P53 400 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 TGM7Q96PF1 710 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 CABLES2Q9BTV7 478 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 MED18Q9BUE0 208 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 RSPO3Q9BXY4 272 aaPredicted RBP4.56□□□□□ -1.68
SMAD4-202ENST00000398417 TRIM2Q9C040 744 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 RALYQ9UKM9 306 aaKnown RBP4.56□□□□□ -1.68
SMAD4-202ENST00000398417 RCE1Q9Y256 329 aa4.56□□□□□ -1.68
SMAD4-202ENST00000398417 SCN9AQ15858 1988 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 A0A0J9YY10 115 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 SHISA3A0PJX4 238 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 HSPA12AO43301 675 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 CTXN1P60606 82 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 ARFRP1Q13795 201 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 ENPP2Q13822 863 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 GPR18Q14330 331 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 TATDN3Q17R31 274 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 ALG11Q2TAA5 492 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 MOB1BQ7L9L4 216 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 APOBEC4Q8WW27 367 aaKnown RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 RASD2Q96D21 266 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 ARPC5LQ9BPX5 153 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 ACOXLQ9NUZ1 547 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 LRIT1Q9P2V4 623 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 YBX2Q9Y2T7 364 aaKnown RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 C4orf47A7E2U8 309 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 IDSB3KWA1 339 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 GALR3O60755 368 aaPredicted RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 GABRA5P31644 462 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 TMEM91Q6ZNR0 172 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 FTMTQ8N4E7 242 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 CNN2Q99439 309 aaKnown RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 TMEM43Q9BTV4 400 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 CCDC86Q9H6F5 360 aaKnown RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 MYEF2Q9P2K5 600 aaKnown RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 KLHL21Q9UJP4 597 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 UBE2QL1A1L167 161 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 ANXA2P2A6NMY6 339 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 F13BP05160 661 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 ANXA2P07355 339 aaKnown RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 ARSBP15848 533 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 CXCR1P25024 350 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 TEAD1P28347 426 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 MLLT3P42568 568 aaPredicted RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 GNG2P59768 71 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 SNTB2Q13425 540 aaKnown RBP4.55□□□□□ -1.68
SMAD4-202ENST00000398417 DUSP6Q16828 381 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 DEFB133Q30KQ1 61 aa4.55□□□□□ -1.68
SMAD4-202ENST00000398417 C1orf189Q5VU69 101 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms