RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 ECSITQ9BQ95 431 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 C7orf50Q9BRJ6 194 aaKnown RBP1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 CHID1Q9BWS9 393 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 ACTR3CQ9C0K3 210 aaPredicted RBP1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 RACGAP1Q9H0H5 632 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 GAREM1Q9H706 876 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 ATP13A3Q9H7F0 1226 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 SP140LQ9H930 580 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 WDR41Q9HAD4 459 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 TMEM165Q9HC07 324 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 RETNQ9HD89 108 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 FGF20Q9NP95 211 aaPredicted RBP1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 SDHAF3Q9NRP4 125 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 ELOVL2Q9NXB9 296 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 THUMPD1Q9NXG2 353 aaKnown RBP1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 CLEC5AQ9NY25 188 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 EURLQ9NYK6 297 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 IL20Q9NYY1 176 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 UXTQ9UBK9 157 aaPredicted RBP1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 CIDEBQ9UHD4 219 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 LSM7Q9UK45 103 aaKnown RBP1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 PSMD13Q9UNM6 376 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 MYRFQ9Y2G1 1151 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 POFUT2Q9Y2G5 429 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 NTNG1Q9Y2I2 539 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 SAR1BQ9Y6B6 198 aa1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 MYH14Q7Z406 1995 aaKnown RBP1.79□□□□□ -2.12
HMGN2P39-201ENST00000398005 METP08581 1390 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 UBN2Q6ZU65 1347 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 TRBV9A0A0B4J1U6 114 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 A0A1W2PQ72 361 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 A0A1W2PR80 420 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 A0A1W2PRF3 423 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 A0A1W2PRM7 423 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 TRABD2BA6NFA1 517 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 MGAT4DA6NG13 374 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 IGLON5A6NGN9 336 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 OR5B21A6NL26 309 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 SRRM3A6NNA2 597 aaPredicted RBP1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 PP2D1A8MPX8 630 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 E7EWF7 191 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 TFECO14948 347 aaPredicted RBP1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 XRCC2O43543 280 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 TYROBPO43914 113 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 PRKYO43930 277 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 SOX15O60248 233 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 GMDSO60547 372 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 MAGEC1O60732 1142 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 RAMP1O60894 148 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 NOL4O94818 638 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 MYO1DO94832 1006 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 C1orf105O95561 183 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 CLIC3O95833 236 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 PAK4O96013 591 aaPredicted RBP1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 CST4P01036 141 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 IGHG4P01861 327 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 FGGP02679 453 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 LGALS2P05162 132 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 FCGR3AP08637 254 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 ACAA1P09110 424 aaPredicted RBP1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 OCMP0CE72 109 aaPredicted RBP1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 TCN1P20061 433 aaPredicted RBP1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 NPR2P20594 1047 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 COX5AP20674 150 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 BCL3P20749 454 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 SYT1P21579 422 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 SLC2A5P22732 501 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 PROZP22891 400 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 IL32P24001 234 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 HTR2CP28335 458 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 IL12AP29459 219 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 FOXN2P32314 431 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 PCK1P35558 622 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 UGT2B10P36537 528 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 ELK3P41970 407 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 RGRP47804 291 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 PRKXP51817 358 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 ARHGDIBP52566 201 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 CRYBA2P53672 197 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 CRISP1P54107 249 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 UCNP55089 124 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 PAX9P55771 341 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 UBE2G2P60604 165 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 UBE2KP61086 200 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 ATP6V0D1P61421 351 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 RND3P61587 244 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 RPS15AP62244 130 aaKnown RBP1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 CSNK1G2P78368 415 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 BASP1P80723 227 aaKnown RBP1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 ZNF33BQ06732 778 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 ZNF154Q13106 437 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 OR5I1Q13606 314 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 GNMTQ14749 295 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 SF3A2Q15428 464 aaKnown RBP1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 MLF2Q15773 248 aaPredicted RBP1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 GABRA6Q16445 453 aa1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 SRSF7Q16629 238 aaKnown RBP eCLIP1.78□□□□□ -2.12
HMGN2P39-201ENST00000398005 HLA-BQ31612 363 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms