RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SMSP52788 366 aa17.59■□□□□ 0.41
PDLIM2-204ENST00000397760 ACER2Q5QJU3 275 aa17.59■□□□□ 0.41
PDLIM2-204ENST00000397760 BICRALQ6AI39 1079 aa17.59■□□□□ 0.41
PDLIM2-204ENST00000397760 TCEANCQ8N8B7 351 aa17.59■□□□□ 0.41
PDLIM2-204ENST00000397760 CLEC1AQ8NC01 280 aa17.59■□□□□ 0.41
PDLIM2-204ENST00000397760 DUSP19Q8WTR2 217 aa17.59■□□□□ 0.41
PDLIM2-204ENST00000397760 METTL7AQ9H8H3 244 aa17.59■□□□□ 0.41
PDLIM2-204ENST00000397760 GALNT9Q9HCQ5 603 aa17.59■□□□□ 0.41
PDLIM2-204ENST00000397760 DNAJC27Q9NZQ0 273 aa17.59■□□□□ 0.41
PDLIM2-204ENST00000397760 KLRF1Q9NZS2 232 aa17.59■□□□□ 0.41
PDLIM2-204ENST00000397760 A0A087WUU8 490 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 A0A0B4J2E0 115 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 A0A1B0GX12 115 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 C2orf72A6NCS6 295 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 MYL12BO14950 172 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 NKX2-8O15522 239 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 LYPD3O95274 346 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 SOX14O95416 240 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 RAB36O95755 333 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 ITGA3P26006 1051 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 ITPKBP27987 946 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 CRYBB2P43320 205 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 ZNF730Q6ZMV8 503 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 DND1Q8IYX4 353 aaKnown RBP17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 TOR1AIP2Q8NFQ8 470 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 OR4K5Q8NGD3 323 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 FGF11Q92914 225 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 SMURF1Q9HCE7 757 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 HPF1Q9NWY4 346 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 NPAP1Q9NZP6 1156 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 SSR3Q9UNL2 185 aa17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 CHCHD2Q9Y6H1 151 aaPredicted RBP17.58■□□□□ 0.41
PDLIM2-204ENST00000397760 IQCMA0A1B0GVH7 501 aa17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 SNPHO15079 494 aa17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 GMFGO60234 142 aa17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 NTN1O95631 604 aa17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 PRKAR1AP10644 381 aa17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 SLC6A8P48029 635 aa17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 GAS1P54826 345 aa17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 LSM11P83369 360 aaKnown RBP eCLIP17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 C17orf67Q0P5P2 114 aa17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 RRM2BQ7LG56 351 aa17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 ZER1Q7Z7L7 766 aa17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 FAM83FQ8NEG4 500 aaPredicted RBP17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 TMEM255BQ8WV15 326 aa17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 ACOT11Q8WXI4 607 aaPredicted RBP17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 THAP4Q8WY91 577 aa17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 PRSS27Q9BQR3 290 aa17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 PRRG3Q9BZD7 231 aa17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 ICAM5Q9UMF0 924 aa17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 WASF3Q9UPY6 502 aa17.58■□□□□ 0.4
PDLIM2-204ENST00000397760 IL1AP01583 271 aa17.57■□□□□ 0.4
PDLIM2-204ENST00000397760 CPEP16870 476 aa17.57■□□□□ 0.4
PDLIM2-204ENST00000397760 WT1P19544 449 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-204ENST00000397760 PTGDSP41222 190 aa17.57■□□□□ 0.4
PDLIM2-204ENST00000397760 CASP3P42574 277 aa17.57■□□□□ 0.4
PDLIM2-204ENST00000397760 P2RX1P51575 399 aa17.57■□□□□ 0.4
PDLIM2-204ENST00000397760 ALG10BQ5I7T1 473 aa17.57■□□□□ 0.4
PDLIM2-204ENST00000397760 ZNF468Q5VIY5 522 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-204ENST00000397760 AKAP14Q86UN6 197 aa17.57■□□□□ 0.4
PDLIM2-204ENST00000397760 OR5W2Q8NH69 310 aa17.57■□□□□ 0.4
PDLIM2-204ENST00000397760 HTRA1Q92743 480 aa17.57■□□□□ 0.4
PDLIM2-204ENST00000397760 KLHDC3Q9BQ90 382 aa17.57■□□□□ 0.4
PDLIM2-204ENST00000397760 FGF20Q9NP95 211 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-204ENST00000397760 TVP23BQ9NYZ1 205 aa17.57■□□□□ 0.4
PDLIM2-204ENST00000397760 STMN3Q9NZ72 180 aa17.57■□□□□ 0.4
PDLIM2-204ENST00000397760 ARGFXA6NJG6 315 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 CHP2O43745 196 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 TNFSF8P32971 234 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 RUNX1T1Q06455 604 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 RAB40BQ12829 278 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 SELENBP1Q13228 472 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 GINS1Q14691 196 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 TMEM44Q2T9K0 475 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 SYT14P1Q58G82 188 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 WBP2NLQ6ICG8 309 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 OR5M10Q6IEU7 315 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 ULK3Q6PHR2 472 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 WDR88Q6ZMY6 472 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 PHC2Q8IXK0 858 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 CLDN22Q8N7P3 220 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 ZNF563Q8TA94 476 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 GNPDA2Q8TDQ7 276 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 SECISBP2Q96T21 854 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 SDHAF3Q9NRP4 125 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 CLEC2DQ9UHP7 191 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 TEKT2Q9UIF3 430 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 TMEM129A0AVI4 362 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 NUDT14O95848 222 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 GTF2E2P29084 291 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 RPS19P39019 145 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 RRADP55042 308 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 CD300CQ08708 224 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 CBFBQ13951 182 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 COL28A1Q2UY09 1125 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 BEST3Q8N1M1 668 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 SCAIQ8N9R8 606 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 OR52I1Q8NGK6 324 aa17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 DNAJA4Q8WW22 397 aaPredicted RBP17.56■□□□□ 0.4
PDLIM2-204ENST00000397760 ZNF582Q96NG8 517 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms