RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 HIST1H2ABP04908 130 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 FSTP19883 344 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 OR1E2P47887 323 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 RPS26P62854 115 aaKnown RBP5.36□□□□□ -1.55
PTPRD-206ENST00000397617 ZNF267Q14586 743 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-206ENST00000397617 PYHIN1Q6K0P9 492 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 ZNF704Q6ZNC4 412 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-206ENST00000397617 Q6ZS52 159 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 HIST3H2AQ7L7L0 130 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 RD3Q7Z3Z2 195 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 FANK1Q8TC84 345 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 HIST1H2ACQ93077 130 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 GTPBP3Q969Y2 492 aaKnown RBP5.36□□□□□ -1.55
PTPRD-206ENST00000397617 RASSF1Q9NS23 344 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 VSX1Q9NZR4 365 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-206ENST00000397617 C17orf105B2RV13 164 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 FAM47E-STBD1D6RA91 191 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 NSDHLQ15738 373 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 SYT9Q86SS6 491 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 SFTPA1Q8IWL2 248 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 GTPBP8Q8N3Z3 284 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-206ENST00000397617 OR52J3Q8NH60 311 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 STT3BQ8TCJ2 826 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 NXPE2Q96DL1 559 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 ADAD1Q96M93 576 aaKnown RBP5.36□□□□□ -1.55
PTPRD-206ENST00000397617 ZNF649Q9BS31 505 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 MEPEQ9NQ76 525 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-206ENST00000397617 RBFOX1Q9NWB1 397 aaKnown RBP5.36□□□□□ -1.55
PTPRD-206ENST00000397617 GALNT8Q9NY28 637 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 PTPN13Q12923 2485 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 SOCS6O14544 535 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 LCKP06239 509 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 SPACA9Q96E40 222 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-206ENST00000397617 STMN3Q9NZ72 180 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 KLHL9Q9P2J3 617 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 GHRLQ9UBU3 117 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 TMEM184BQ9Y519 407 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-206ENST00000397617 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 A0A0A6YYC8 382 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-206ENST00000397617 I3L1I5 382 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-206ENST00000397617 MEN1O00255 615 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 SULT1C2O00338 296 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 UPK1BO75841 260 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 POU1F1P28069 291 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 DAP3P51398 398 aaKnown RBP5.36□□□□□ -1.55
PTPRD-206ENST00000397617 CDK5R1Q15078 307 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 FAM111BQ6SJ93 734 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 SZRD1Q7Z422 152 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 CPOQ8IVL8 374 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 TM9SF4Q92544 642 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 KISS1RQ969F8 398 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-206ENST00000397617 FOXRED1Q96CU9 486 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-206ENST00000397617 TVP23BQ9NYZ1 205 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 FAM208BQ5VWN6 2430 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 ANKUB1A6NFN9 424 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 D6RAR5 112 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 CA11O75493 328 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 S100A1P23297 94 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 EMP2P54851 167 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 IKZF1Q13422 519 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 KRT74Q7RTS7 529 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 NFAM1Q8NET5 270 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-206ENST00000397617 OR52R1Q8NGF1 315 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 M1APQ8TC57 530 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 TMIGD2Q96BF3 282 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 PLAGL1Q9UM63 463 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 A0A1W2PNV4 684 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 ALOX12BO75342 701 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 SERPINA7P05543 415 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 CRYBB2P43320 205 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 MC2RQ01718 297 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 CHAF1BQ13112 559 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 MED22Q15528 200 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 IER5LQ5T953 404 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 ARHGAP40Q5TG30 622 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 TMEM164Q5U3C3 297 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 C17orf50Q8WW18 174 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 COL26A1Q96A83 441 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 STRADBQ9C0K7 418 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 TOR4AQ9NXH8 423 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 IL20RAQ9UHF4 553 aa5.36□□□□□ -1.55
PTPRD-206ENST00000397617 LDB3O75112 727 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 C8orf89P0DMQ9 161 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 SLC2A5P22732 501 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 LSM6P62312 80 aaKnown RBP5.35□□□□□ -1.55
PTPRD-206ENST00000397617 PLCXD2Q0VAA5 305 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 NR0B2Q15466 257 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 TBC1D25Q3MII6 688 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 ZNF684Q5T5D7 378 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 ACSM5Q6NUN0 579 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 MZT2BQ6NZ67 158 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 OR4C3Q8NH37 302 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 ZCCHC10Q8TBK6 192 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 LMX1AQ8TE12 382 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 KAT2AQ92830 837 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 KLK6Q92876 244 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 IMMP1LQ96LU5 166 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 ZNF587Q96SQ5 575 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-206ENST00000397617 SLITRK2Q9H156 845 aa5.35□□□□□ -1.55
PTPRD-206ENST00000397617 GPR83Q9NYM4 423 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms