RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 OR10G2Q8NGC3 310 aa21.16■□□□□ 0.98
TSPAN4-203ENST00000397397 FAM46AQ96IP4 442 aaKnown RBP21.16■□□□□ 0.98
TSPAN4-203ENST00000397397 MOGAT1Q96PD6 335 aa21.16■□□□□ 0.98
TSPAN4-203ENST00000397397 DCLRE1BQ9H816 532 aa21.16■□□□□ 0.98
TSPAN4-203ENST00000397397 PAQR5Q9NXK6 330 aaPredicted RBP21.16■□□□□ 0.98
TSPAN4-203ENST00000397397 ZNF835Q9Y2P0 537 aa21.16■□□□□ 0.98
TSPAN4-203ENST00000397397 ZNF462Q96JM2 2506 aa21.16■□□□□ 0.98
TSPAN4-203ENST00000397397 ZGRF1Q86YA3 2104 aa21.16■□□□□ 0.98
TSPAN4-203ENST00000397397 AHRRA9YTQ3 701 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 FTCDNL1E5RQL4 147 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 PRRG2O14669 202 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 SLC19A2O60779 497 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 OR7A10O76100 309 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 GPR4P46093 362 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 OMPP47874 163 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 RAC3P60763 192 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 TLE1Q04724 770 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 EMC4Q5J8M3 183 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 PPP4R4Q6NUP7 873 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 PGBD2Q6P3X8 592 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 SLC46A3Q7Z3Q1 461 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 HS3ST5Q8IZT8 346 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 ZPLD1Q8TCW7 415 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 ZHX1-C8orf76Q96EF9 292 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 NRBF2Q96F24 287 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 C6orf203Q9P0P8 240 aaPredicted RBP21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 KIAA1549Q9HCM3 1950 aa21.15■□□□□ 0.98
TSPAN4-203ENST00000397397 SAC3D1A6NKF1 404 aa21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 CLCA1A8K7I4 914 aa21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 SYNGR4O95473 234 aa21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 MT-ATP6P00846 226 aa21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 FUT1P19526 365 aa21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 MAKP20794 623 aa21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 GRPRP30550 384 aa21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 MFSD13AQ14CX5 517 aa21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 ZER1Q7Z7L7 766 aa21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 HIPK1Q86Z02 1210 aa21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 SVOPLQ8N434 492 aa21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 AQP11Q8NBQ7 271 aa21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 GNPDA2Q8TDQ7 276 aa21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 CPNE4Q96A23 557 aaPredicted RBP21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 ASPNQ9BXN1 380 aa21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 FKRPQ9H9S5 495 aa21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 NANSQ9NR45 359 aa21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 MAGED1Q9Y5V3 778 aaPredicted RBP21.14■□□□□ 0.98
TSPAN4-203ENST00000397397 FIGNL2A6NMB9 653 aa21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 EFCAB9A8MZ26 197 aa21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 G3V2T6 193 aa21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 DNPH1O43598 174 aa21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 WDR1O75083 606 aa21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 AKR7A3O95154 331 aa21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 SAGP10523 405 aaPredicted RBP21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 GABRA1P14867 456 aa21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 ENPP1P22413 925 aa21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 PRKACGP22612 351 aa21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 NUP107P57740 925 aa21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 SF3B4Q15427 424 aaKnown RBP eCLIP21.13■□□□□ 0.972e-7■■■■■ 32.9
TSPAN4-203ENST00000397397 ZNF770Q6IQ21 691 aaPredicted RBP21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 Q6ZPB1 254 aaPredicted RBP21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 MAMDC2Q7Z304 686 aaPredicted RBP21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 ZDHHC13Q8IUH4 622 aa21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 LRRC17Q8N6Y2 441 aa21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 NAA11Q9BSU3 229 aaPredicted RBP21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 STX18Q9P2W9 335 aaKnown RBP21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 ZNF229Q9UJW7 825 aa21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 MCTS1Q9ULC4 181 aaKnown RBP21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 OAZ3Q9UMX2 235 aa21.13■□□□□ 0.97
TSPAN4-203ENST00000397397 IGHV3-15A0A0B4J1V0 119 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 ARRDC5A6NEK1 342 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 M0R082 166 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 MGRN1O60291 552 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 EIF1BO60739 113 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 GASTP01350 101 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 HIST1H2ABP04908 130 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 PON3Q15166 354 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 ZNF239Q16600 458 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 C1orf94Q6P1W5 598 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 TMPRSS11FQ6ZWK6 438 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 HIST3H2AQ7L7L0 130 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 STK32CQ86UX6 486 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 ZNF417Q8TAU3 575 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 ROBO4Q8WZ75 1007 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 HIST1H2ACQ93077 130 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 SDCCAG3Q96C92 435 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 TRIB1Q96RU8 372 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 ZNF587Q96SQ5 575 aaPredicted RBP21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 PRRG4Q9BZD6 226 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 MGAT4BQ9UQ53 548 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 CORINQ9Y5Q5 1042 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 FASNP49327 2511 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 J3QKU1 62 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 FZD7O75084 574 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 POU2F1P14859 743 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 KLK2P20151 261 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 PTGER4P35408 488 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 AGFG1P52594 562 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 ACSF3Q4G176 576 aaPredicted RBP21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 OTUD3Q5T2D3 398 aaPredicted RBP21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 PLXDC2Q6UX71 529 aa21.12■□□□□ 0.97
TSPAN4-203ENST00000397397 DOLPP1Q86YN1 238 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms