RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ENPP1P22413 925 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 MAP2K6P52564 334 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 CSNK2A1P68400 391 aaPredicted RBP12.99□□□□□ -0.33
SEC13-208ENST00000397109 VEZF1Q14119 521 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 FAM98BQ52LJ0 330 aaKnown RBP12.99□□□□□ -0.33
SEC13-208ENST00000397109 SYT14P1Q58G82 188 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 TMEM201Q5SNT2 666 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 INTS11Q5TA45 600 aaKnown RBP12.99□□□□□ -0.33
SEC13-208ENST00000397109 LPCAT4Q643R3 524 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 TMPPEQ6ZT21 453 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 BEND4Q6ZU67 534 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 C11orf65Q8NCR3 313 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 EME1Q96AY2 570 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 BDH2Q9BUT1 245 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 CLEC4MQ9H2X3 399 aaPredicted RBP12.99□□□□□ -0.33
SEC13-208ENST00000397109 MAGIXQ9H6Y5 334 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 BCL2L10Q9HD36 194 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 CTPS2Q9NRF8 586 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 KLHL9Q9P2J3 617 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 EDARQ9UNE0 448 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 CDHR4A6H8M9 788 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 C5orf58C9J3I9 102 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 RPSAP08865 295 aaKnown RBP12.98□□□□□ -0.33
SEC13-208ENST00000397109 RAP2AP10114 183 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 TFPIP10646 304 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 AGTR1P30556 359 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 PCGF2P35227 344 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 UGT2B10P36537 528 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 SLC1A3P43003 542 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 POLR2HP52434 150 aaKnown RBP12.98□□□□□ -0.33
SEC13-208ENST00000397109 PLAURQ03405 335 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 CHRNB3Q05901 458 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 EPS8Q12929 822 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 MED21Q13503 144 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 RNF220Q5VTB9 566 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 ZNF550Q7Z398 422 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 VRK2Q86Y07 508 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 SLC30A8Q8IWU4 369 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 BBS10Q8TAM1 723 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 ABHD3Q8WU67 409 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 LRTOMTQ8WZ04 291 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 MAL2Q969L2 176 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 ZHX1-C8orf76Q96EF9 292 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 C9orf16Q9BUW7 83 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 KLHL13Q9P2N7 655 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 AURKCQ9UQB9 309 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 ZNF443Q9Y2A4 671 aaPredicted RBP12.98□□□□□ -0.33
SEC13-208ENST00000397109 HDGFL3Q9Y3E1 203 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 TESMINQ9Y4I5 508 aa12.98□□□□□ -0.33
SEC13-208ENST00000397109 SULT2B1O00204 365 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 CXCR6O00574 342 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 DNPH1O43598 174 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 YES1P07947 543 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 ZNF26P17031 533 aaPredicted RBP12.97□□□□□ -0.33
SEC13-208ENST00000397109 DIO1P49895 249 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 PCBP3P57721 371 aaKnown RBP12.97□□□□□ -0.33
SEC13-208ENST00000397109 CDK6Q00534 326 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 VMACQ2NL98 169 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 REEP3Q6NUK4 255 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 ADGRG3Q86Y34 549 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 DCAF13Q9NV06 445 aaKnown RBP12.97□□□□□ -0.33
SEC13-208ENST00000397109 ZNF226Q9NYT6 803 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 CSMD1Q96PZ7 3565 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 TMED7-TICAM2A0A0A6YYA0 188 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 MAGEA13PA6NCF6 341 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 AP3D1O14617 1153 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 ZNF208O43345 1280 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 CYTIPO60759 359 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 ADAM11O75078 769 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 DEAF1O75398 565 aaPredicted RBP12.97□□□□□ -0.33
SEC13-208ENST00000397109 PGM3O95394 542 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 PMS2P2O95744 297 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 ETS2P15036 469 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 PPP3CBP16298 524 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 COPZ1P61923 177 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 RASGEF1BQ0VAM2 473 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 SCARB2Q14108 478 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 ATP6AP1Q15904 470 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 EXOC3L2Q2M3D2 409 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 RPS26P11Q5JNZ5 115 aaPredicted RBP12.97□□□□□ -0.33
SEC13-208ENST00000397109 ZNF836Q6ZNA1 936 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 CDC20BQ86Y33 519 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 LURAP1LQ8IV03 231 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 TUSC5Q8IXB3 177 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 SLC35B4Q969S0 331 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 DDIT4LQ96D03 193 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 WFIKKN1Q96NZ8 548 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 MED18Q9BUE0 208 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 ADAM19Q9H013 955 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 BCO1Q9HAY6 547 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 RLIMQ9NVW2 624 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 GMPR2Q9P2T1 348 aaKnown RBP12.97□□□□□ -0.33
SEC13-208ENST00000397109 OSGIN1Q9UJX0 560 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 SAMD4AQ9UPU9 718 aaKnown RBP12.97□□□□□ -0.33
SEC13-208ENST00000397109 TRAPPC4Q9Y296 219 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 TMED7Q9Y3B3 224 aa12.97□□□□□ -0.33
SEC13-208ENST00000397109 TIPRLO75663 272 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 FESP07332 822 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 NCK1P16333 377 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 TACR3P29371 465 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms