RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 DTX3Q8N9I9 347 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 C19orf18Q8NEA5 215 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 ELOA3Q8NG57 546 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 OR4M2Q8NGB6 313 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 GPX7Q96SL4 187 aaPredicted RBP15.12■□□□□ 0.01
TRIM39-205ENST00000396551 RTN4RQ9BZR6 473 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 ASXL3Q9C0F0 2248 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 UBE2ZQ9H832 354 aaPredicted RBP15.12■□□□□ 0.01
TRIM39-205ENST00000396551 RNF121Q9H920 327 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 CYSLTR2Q9NS75 346 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 MYO15AQ9UKN7 3530 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 DDAH2O95865 285 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 IGKV3-11P04433 115 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 AQP2P41181 271 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 CSNK1EP49674 416 aaKnown RBP15.12■□□□□ 0.01
TRIM39-205ENST00000396551 EGR4Q05215 589 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 CDK5R1Q15078 307 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 TPRA1Q86W33 373 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 SYS1Q8N2H4 156 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 OR4M1Q8NGD0 313 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 ZNF721Q8TF20 911 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 ADIPOR1Q96A54 375 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 SLC46A1Q96NT5 459 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 CTRCQ99895 268 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 MMACHCQ9Y4U1 282 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 FER1L5A0AVI2 2057 aa15.12■□□□□ 0.01
TRIM39-205ENST00000396551 PIAS2O75928 621 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 EPHA4P54764 986 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 LTBQ06643 244 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 BIKQ13323 160 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 PON3Q15166 354 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 ZNF74Q16587 644 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 PIAS4Q8N2W9 510 aaPredicted RBP15.11■□□□□ 0.01
TRIM39-205ENST00000396551 LRRC75AQ8NAA5 344 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 OR1L3Q8NH93 324 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 ENKURQ8TC29 256 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 KCTD12Q96CX2 325 aaKnown RBP15.11■□□□□ 0.01
TRIM39-205ENST00000396551 Q96M85 177 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 HMX3A6NHT5 357 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 PAHP00439 452 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 CAPZA2P47755 286 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 GDI2P50395 445 aaKnown RBP15.11■□□□□ 0.01
TRIM39-205ENST00000396551 RPS11P62280 158 aaKnown RBP eCLIP15.11■□□□□ 0.01
TRIM39-205ENST00000396551 ISXQ2M1V0 245 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 UTS2BQ765I0 119 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 TEX19Q8NA77 164 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 ZNF527Q8NB42 609 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 SMIM19Q96E16 107 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 ZNF486Q96H40 463 aaPredicted RBP15.11■□□□□ 0.01
TRIM39-205ENST00000396551 ZC3HAV1LQ96H79 300 aaKnown RBP15.11■□□□□ 0.01
TRIM39-205ENST00000396551 RBFOX1Q9NWB1 397 aaKnown RBP15.11■□□□□ 0.01
TRIM39-205ENST00000396551 NCDNQ9UBB6 729 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 SEC16AO15027 2179 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 IGHV1OR21-1A0A087WYE8 117 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 TEX13CA0A0J9YWL9 993 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 A0A1W2PPK0 400 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 C17orf51A8MQB3 221 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 SCDO00767 359 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 HPGDP15428 266 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 CDKN2AP42771 156 aaKnown RBP15.11■□□□□ 0.01
TRIM39-205ENST00000396551 ACTA2P62736 377 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 ACTG2P63267 376 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 LINC01590Q5TEZ4 76 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 LRRC28Q86X40 367 aaPredicted RBP15.11■□□□□ 0.01
TRIM39-205ENST00000396551 MS4A15Q8N5U1 240 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 SAMD12Q8N8I0 201 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 LCORQ96JN0 433 aaPredicted RBP15.11■□□□□ 0.01
TRIM39-205ENST00000396551 FRMD6Q96NE9 622 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 TTYH2Q9BSA4 534 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 NUDT9Q9BW91 350 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 NRSN2Q9GZP1 204 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 EXOSC3Q9NQT5 275 aaKnown RBP15.11■□□□□ 0.01
TRIM39-205ENST00000396551 ACOXLQ9NUZ1 547 aa15.11■□□□□ 0.01
TRIM39-205ENST00000396551 A0A1B0GVC2 190 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 FRG2CA6NGY1 282 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 A6NIN4 97 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 BLOC1S5-TXNDC5H3BN57 136 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 ZNF264O43296 627 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 LYRM1O43325 122 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 TFPIP10646 304 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 PNMTP11086 282 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 RORAP35398 523 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 DDOSTP39656 456 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 PRPS1P60891 318 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 IFITM2Q01629 132 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 LGALS3BPQ08380 585 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 TBRG1Q3YBR2 411 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 FAM122BQ7Z309 247 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 SYT9Q86SS6 491 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 SLITRK4Q8IW52 837 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 LIPHQ8WWY8 451 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 THAP4Q8WY91 577 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 OR1F2PQ96R84 312 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 CCNL2Q96S94 520 aaPredicted RBP15.1■□□□□ 0.01
TRIM39-205ENST00000396551 ADOQ96SZ5 270 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 SYNDIG1Q9H7V2 258 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 ZNF346Q9UL40 294 aaKnown RBP15.1■□□□□ 0.01
TRIM39-205ENST00000396551 HIF3AQ9Y2N7 669 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 FAM171A2A8MVW0 826 aa15.1■□□□□ 0.01
TRIM39-205ENST00000396551 PRR32B1ATL7 298 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms