RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 MOGAT1Q96PD6 335 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 DCLRE1CQ96SD1 692 aaKnown RBP13.63□□□□□ -0.23
CBX3-202ENST00000396386 KLHDC3Q9BQ90 382 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 HDHD5Q9BXW7 423 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 SEMA4CQ9C0C4 833 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 ADAM19Q9H013 955 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 KCNN2Q9H2S1 579 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 POLE4Q9NR33 117 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 PLEKHB1Q9UF11 243 aaPredicted RBP13.63□□□□□ -0.23
CBX3-202ENST00000396386 NOX1Q9Y5S8 564 aa13.63□□□□□ -0.23
CBX3-202ENST00000396386 A0A1W2PQL4 384 aaPredicted RBP13.62□□□□□ -0.23
CBX3-202ENST00000396386 SLC35F4A4IF30 521 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 OR6C70A6NIJ9 312 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 BLOC1S5-TXNDC5H3BN57 136 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 SCO2O43819 266 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 GMFGO60234 142 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 NUDT14O95848 222 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 ASAH2BP0C7U1 165 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 GP1BBP13224 206 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 APEHP13798 732 aaKnown RBP13.62□□□□□ -0.23
CBX3-202ENST00000396386 UQCRC1P31930 480 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 FOXL2P58012 376 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 CBFBQ13951 182 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 TRAM1Q15629 374 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 ALG10Q5BKT4 473 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 JAZF1Q86VZ6 243 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 GALNT6Q8NCL4 622 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 METTL21AQ8WXB1 218 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 DEPDC7Q96QD5 511 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 NMNAT3Q96T66 252 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 SP140LQ9H930 580 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 ZNF229Q9UJW7 825 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 ZMIZ1Q9ULJ6 1067 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 TRAPPC4Q9Y296 219 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 CABIN1Q9Y6J0 2220 aa13.62□□□□□ -0.23
CBX3-202ENST00000396386 TEX13CA0A0J9YWL9 993 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 J3QLW9 94 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 KHNYNO15037 678 aaKnown RBP13.61□□□□□ -0.23
CBX3-202ENST00000396386 CER1O95813 267 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 TFP02787 698 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 CD14P08571 375 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 OR2T7P0C7T2 308 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 ZNF19P17023 458 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 SPI1P17947 270 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 CXCR1P25024 350 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 HOXD12P35452 270 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 ACTA2P62736 377 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 ACTG2P63267 376 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 DAB2P98082 770 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 SIGLEC14Q08ET2 396 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 IL10RAQ13651 578 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 EFR3AQ14156 821 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 PON3Q15166 354 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 PHF19Q5T6S3 580 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 DDI2Q5TDH0 399 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 ARL9Q6T311 187 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 VASH1Q7L8A9 365 aaPredicted RBP13.61□□□□□ -0.23
CBX3-202ENST00000396386 PPP1R3BQ86XI6 285 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 SLC35F2Q8IXU6 374 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 LRRC75AQ8NAA5 344 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 LSM14AQ8ND56 463 aaKnown RBP13.61□□□□□ -0.23
CBX3-202ENST00000396386 NFAM1Q8NET5 270 aaPredicted RBP13.61□□□□□ -0.23
CBX3-202ENST00000396386 OR2T27Q8NH04 317 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 ZNF524Q96C55 264 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 NMNAT2Q9BZQ4 307 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 FKRPQ9H9S5 495 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 PCDHGB7Q9Y5F8 929 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 SIRT4Q9Y6E7 314 aaPredicted RBP13.61□□□□□ -0.23
CBX3-202ENST00000396386 V9GYH0 126 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 SDK1Q7Z5N4 2213 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 SMIM30A4D0T7 59 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 IMPA2O14732 288 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 FADS1O60427 444 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 SERPINI2O75830 405 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 ONECUT2O95948 504 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 PTTG1O95997 202 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 NAA10P41227 235 aaPredicted RBP13.61□□□□□ -0.23
CBX3-202ENST00000396386 DIO1P49895 249 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 P2RX1P51575 399 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 DEFA1P59665 94 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 DEFA3P59666 94 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 CLPPQ16740 277 aaPredicted RBP13.61□□□□□ -0.23
CBX3-202ENST00000396386 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.61□□□□□ -0.235e-7■□□□□ 10.5
CBX3-202ENST00000396386 ZNF385CQ66K41 422 aaPredicted RBP13.61□□□□□ -0.23
CBX3-202ENST00000396386 LEG1Q6P5S2 330 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 TMEM91Q6ZNR0 172 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 OVCH1Q7RTY7 1134 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 FAM122BQ7Z309 247 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 MAML2Q8IZL2 1156 aaPredicted RBP13.61□□□□□ -0.23
CBX3-202ENST00000396386 POC5Q8NA72 575 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 ZPLD1Q8TCW7 415 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 KTI12Q96EK9 354 aaPredicted RBP13.61□□□□□ -0.23
CBX3-202ENST00000396386 Q96M85 177 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 DDOQ99489 341 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 LPAR4Q99677 370 aa13.61□□□□□ -0.23
CBX3-202ENST00000396386 TRAV36DV7A0A075B6V5 113 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 OR6C68A6NDL8 312 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 C17orf51A8MQB3 221 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 PLPP2O43688 288 aa13.6□□□□□ -0.23
CBX3-202ENST00000396386 SLC25A12O75746 678 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms