RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 OBP2BQ9NPH6 170 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 VSX1Q9NZR4 365 aaPredicted RBP5.08□□□□□ -1.6
VPS13C-204ENST00000395898 CORINQ9Y5Q5 1042 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 LAMB2P55268 1798 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 TLCD2A6NGC4 264 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 SCAF4O95104 1147 aaKnown RBP5.08□□□□□ -1.6
VPS13C-204ENST00000395898 AIFM1O95831 613 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 IMPA1P29218 277 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 SRPXP78539 464 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 MFGE8Q08431 387 aaPredicted RBP5.08□□□□□ -1.6
VPS13C-204ENST00000395898 YIF1BQ5BJH7 314 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 DESI1Q6ICB0 168 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 ELMOD3Q96FG2 381 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 OR2M2Q96R28 347 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 CMSS1Q9BQ75 279 aaKnown RBP5.08□□□□□ -1.6
VPS13C-204ENST00000395898 LIN7BQ9HAP6 207 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 PLCXD1Q9NUJ7 323 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 EMC9Q9Y3B6 208 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 PCDHGA1Q9Y5H4 931 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 HS3ST3A1Q9Y663 406 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 PIKFYVEQ9Y2I7 2098 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 LOC105369274A0A096LPK9 316 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 FAM155AB1AL88 458 aaPredicted RBP5.08□□□□□ -1.6
VPS13C-204ENST00000395898 BCAS1O75363 584 aaPredicted RBP5.08□□□□□ -1.6
VPS13C-204ENST00000395898 SCG5P05408 212 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 CTSCP53634 463 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 RAP2BP61225 183 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 RAB11AP62491 216 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 HBG1P69891 147 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 HBG2P69892 147 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 PDLIM3Q53GG5 364 aaPredicted RBP5.08□□□□□ -1.6
VPS13C-204ENST00000395898 CD300LGQ6UXG3 332 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 TAS1R1Q7RTX1 841 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 CD163Q86VB7 1156 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 WDR5BQ86VZ2 330 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 GRAMD2AQ8IUY3 354 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 GLB1L2Q8IW92 636 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 OR4N4Q8N0Y3 316 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 OR7G1Q8NGA0 311 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 BIN3Q9NQY0 253 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 EHFQ9NZC4 300 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 EDARQ9UNE0 448 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 UNC13CQ8NB66 2214 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 OR7A17O14581 309 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 GASTP01350 101 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 ALDOCP09972 364 aaKnown RBP5.08□□□□□ -1.6
VPS13C-204ENST00000395898 UBBP0CG47 229 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 HTR5AP47898 357 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 EXOSC7Q15024 291 aaKnown RBP5.08□□□□□ -1.6
VPS13C-204ENST00000395898 PLK5Q496M5 336 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 FAM78AQ5JUQ0 283 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 YOD1Q5VVQ6 348 aaPredicted RBP5.08□□□□□ -1.6
VPS13C-204ENST00000395898 APOOLQ6UXV4 268 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 TMEM178AQ8NBL3 297 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 NANPQ8TBE9 248 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 GIMAP1Q8WWP7 306 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 OR14A2Q96R54 314 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 MFFQ9GZY8 342 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 EGLN3Q9H6Z9 239 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 LUZP4Q9P127 313 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 MMACHCQ9Y4U1 282 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 ASCC3Q8N3C0 2202 aaKnown RBP5.08□□□□□ -1.6
VPS13C-204ENST00000395898 A0A0D9SG52 128 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 T-ENOLP0DO92 83 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF133P52736 654 aaPredicted RBP5.08□□□□□ -1.6
VPS13C-204ENST00000395898 RFPL4BQ6ZWI9 263 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 SMIM15Q7Z3B0 74 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 BBS1Q8NFJ9 593 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 FRZBQ92765 325 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 KATNB1Q9BVA0 655 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 VN1R3Q9BXE9 311 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 A4GALTQ9NPC4 353 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 ASF1BQ9NVP2 202 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 GPATCH2Q9NW75 528 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 PTTG3PQ9NZH4 202 aa5.08□□□□□ -1.6
VPS13C-204ENST00000395898 C17orf112F2Z3M2 114 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 RPS2P15880 293 aaKnown RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 NFYAP23511 347 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 GIPRP48546 466 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 TAS2R30P59541 319 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 HENMT1Q5T8I9 393 aaKnown RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 NPSR1Q6W5P4 371 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 NDUFAF4Q9P032 175 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 NOSIPQ9Y314 301 aaKnown RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 PRSS21Q9Y6M0 314 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 SLC22A23A1A5C7 686 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 PRAMEF27A3QJZ7 478 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 EPHA1P21709 976 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 HTR1FP30939 366 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 RPS27AP62979 156 aaKnown RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 UBA52P62987 128 aaKnown RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 CATR1Q13166 79 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 PRAMEF9Q5VWM5 478 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 DPY19L2P2Q6ZN68 376 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 B3GNT8Q7Z7M8 397 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 PARP16Q8N5Y8 322 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 OR4F15Q8NGB8 312 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 NKX3-1Q99801 234 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 SORBS1Q9BX66 1292 aaKnown RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 NOX3Q9HBY0 568 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms