RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 ZNF764Q96H86 408 aaPredicted RBP11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 STACQ99469 402 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 ZNF416Q9BWM5 594 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 HOXD1Q9GZZ0 328 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 MIEF1Q9NQG6 463 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 DUSP22Q9NRW4 184 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 ACER3Q9NUN7 267 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 TMEM45AQ9NWC5 275 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 MKS1Q9NXB0 559 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 GIN1Q9NXP7 522 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 NUP50Q9UKX7 468 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 HDGFL3Q9Y3E1 203 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 DTNAQ9Y4J8 743 aa11.68□□□□□ -0.54
VCPKMT-201ENST00000395859 PPIAL4EA0A075B759 164 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 PPIAL4CA0A0B4J2A2 164 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 SERTM1A2A2V5 107 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 ZNF503-AS2A6NEH8 195 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 NPIPB8E9PQR5 432 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 PPIAL4DF5H284 164 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 PIP5K1BO14986 540 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 TM9SF1O15321 606 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 ZNF264O43296 627 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 TSPAN15O95858 294 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 LGI1O95970 557 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 KRT6AP02538 564 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 KRT6BP04259 564 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 SNRPAP09012 282 aaKnown RBP11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 RBP1P09455 135 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 ALOX5P09917 674 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 PPIAL4FP0DN26 164 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 CBR1P16152 277 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 CDH2P19022 906 aaPredicted RBP11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 TCN1P20061 433 aaPredicted RBP11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 KRT6CP48668 564 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 SEC24CP53992 1094 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 ATP12AP54707 1039 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 HSPB3Q12988 150 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 ZNF311Q5JNZ3 666 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 VAX1Q5SQQ9 334 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 POP5Q969H6 163 aaKnown RBP11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 MRRFQ96E11 262 aaKnown RBP11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 ZHX1-C8orf76Q96EF9 292 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 NOX3Q9HBY0 568 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 MOV10Q9HCE1 1003 aaKnown RBP11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 SERINC1Q9NRX5 453 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 NKIRAS1Q9NYS0 192 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 MID2Q9UJV3 735 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 TRAPPC4Q9Y296 219 aa11.67□□□□□ -0.54
VCPKMT-201ENST00000395859 OR6C65A6NJZ3 312 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 SLC22A31A6NKX4 558 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 POC1B-GALNT4F8VUJ3 575 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 H3BNH8 94 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 ULK1O75385 1050 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 SBK3P0C264 359 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 HOXB1P14653 301 aaPredicted RBP11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 NR4A1P22736 598 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 GCAP28676 217 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 CLK1P49759 484 aaKnown RBP11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 PRKAG1P54619 331 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 RELBQ01201 579 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 MERTKQ12866 999 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 SNTB2Q13425 540 aaKnown RBP11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 ATP6AP1LQ52LC2 224 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 REP15Q6BDI9 236 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 C16orf87Q6PH81 154 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 BRICD5Q6PL45 260 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 C17orf107Q6ZR85 190 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 LSRQ86X29 649 aaPredicted RBP11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 TMEM151AQ8N4L1 468 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 RFWD2Q8NHY2 731 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 DCAKDQ8WVC6 231 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 CDS1Q92903 461 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 CIDECQ96AQ7 238 aaPredicted RBP11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 RAB39BQ96DA2 213 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 ZNF385AQ96PM9 386 aaKnown RBP11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 THUMPD3Q9BV44 507 aaKnown RBP11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 OR11A1Q9GZK7 315 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 LAT2Q9GZY6 243 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 VPS11Q9H270 941 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 PIGUQ9H490 435 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 ZNF385DQ9H6B1 395 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 OXSMQ9NWU1 459 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 MYEF2Q9P2K5 600 aaKnown RBP11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 KCNE5Q9UJ90 142 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 CMAHPQ9Y471 501 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 NOTCH3Q9UM47 2321 aa11.66□□□□□ -0.54
VCPKMT-201ENST00000395859 LOC100653049A0A140TA62 436 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 TRIM49D1C9J1S8 452 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 G3V4G9 280 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 GTPBP1O00178 669 aaKnown RBP11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 KRT34O76011 436 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 UBL4AP11441 157 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 SELEP16581 610 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 APOBEC1P41238 236 aaKnown RBP11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 ALDH3B1P43353 468 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 UBE2NP61088 152 aaKnown RBP11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 DAG1Q14118 895 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 ZNF385BQ569K4 471 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 ZNF362Q5T0B9 420 aaPredicted RBP11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 AVPI1Q5T686 147 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms