RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 SDF2Q99470 211 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 ADAT1Q9BUB4 502 aaKnown RBP13.17□□□□□ -0.3
CLIP2-203ENST00000395060 MTHFD2LQ9H903 347 aaPredicted RBP13.17□□□□□ -0.3
CLIP2-203ENST00000395060 PTTG3PQ9NZH4 202 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 GTF2A1LQ9UNN4 478 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 SLC35A3Q9Y2D2 325 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 PCDHGA9Q9Y5G4 932 aaKnown RBP13.17□□□□□ -0.3
CLIP2-203ENST00000395060 NPFFR2Q9Y5X5 522 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 STON1Q9Y6Q2 735 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 GXYLT2A0PJZ3 443 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 OTOL1A6NHN0 477 aaPredicted RBP13.17□□□□□ -0.3
CLIP2-203ENST00000395060 RCBTB2O95199 551 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 PRNPP04156 253 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 CTNNB1P35222 781 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 PTH2RP49190 550 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 RPS11P62280 158 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLIP2-203ENST00000395060 ERVK-25P63136 954 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 SHC2P98077 582 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 CDK3Q00526 305 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 BDH1Q02338 343 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 C4orf46Q504U0 113 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 UBE2NLQ5JXB2 153 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 RNF44Q7L0R7 432 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 COX18Q8N8Q8 333 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 OR52E1Q8NGJ3 308 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 BRIX1Q8TDN6 353 aaKnown RBP13.17□□□□□ -0.3
CLIP2-203ENST00000395060 SHARPINQ9H0F6 387 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 EPHX3Q9H6B9 360 aa13.17□□□□□ -0.3
CLIP2-203ENST00000395060 C17orf113A0A1B0GUU1 675 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 TBX19O60806 448 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 ADAM11O75078 769 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 NGFRP08138 427 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 CPMP14384 443 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 P2RX1P51575 399 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 CBFBQ13951 182 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 ETFDHQ16134 617 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 METRNLQ641Q3 311 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 GLDNQ6ZMI3 551 aaPredicted RBP13.16□□□□□ -0.3
CLIP2-203ENST00000395060 MAMSTRQ6ZN01 415 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 OR2L5Q8NG80 312 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 RASD2Q96D21 266 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 SMIM19Q96E16 107 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 NRIP3Q9NQ35 241 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 ANKRD10Q9NXR5 420 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 ABRACLQ9P1F3 81 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 CPNE7Q9UBL6 633 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 ZNF230Q9UIE0 474 aaPredicted RBP13.16□□□□□ -0.3
CLIP2-203ENST00000395060 CES1P1Q9UKY3 287 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 CA5BQ9Y2D0 317 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 OR10H1Q9Y4A9 318 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 COL4A6Q14031 1691 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 DOK2O60496 412 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 SC5DO75845 299 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 TIMP1P01033 207 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 OR8G3PP0DMU2 310 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 ITPKBP27987 946 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 NANOS3P60323 173 aaKnown RBP13.16□□□□□ -0.3
CLIP2-203ENST00000395060 MLC1Q15049 377 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 GSG1LQ6UXU4 331 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 TMEM64Q6YI46 380 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 C12orf76Q8N812 135 aaPredicted RBP13.16□□□□□ -0.3
CLIP2-203ENST00000395060 DUSP19Q8WTR2 217 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 THEM6Q8WUY1 208 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 SLC25A28Q96A46 364 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 ZMAT3Q9HA38 289 aaKnown RBP13.16□□□□□ -0.3
CLIP2-203ENST00000395060 CALML5Q9NZT1 146 aa13.16□□□□□ -0.3
CLIP2-203ENST00000395060 ING1Q9UK53 422 aaPredicted RBP13.16□□□□□ -0.3
CLIP2-203ENST00000395060 IFITM5A6NNB3 132 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 H7C1C5 153 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 MOSPD3O75425 235 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 RPN2P04844 631 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 LCN6P62502 163 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 PRSS41Q7RTY9 318 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 SLC35F2Q8IXU6 374 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 OR8D1Q8WZ84 308 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 S100A16Q96FQ6 103 aaKnown RBP13.15□□□□□ -0.3
CLIP2-203ENST00000395060 ZNF681Q96N22 645 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 ANKRD19PQ9H560 264 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 NPDC1Q9NQX5 325 aaPredicted RBP13.15□□□□□ -0.3
CLIP2-203ENST00000395060 KIF25Q9UIL4 384 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 ZNF223Q9UK11 482 aaPredicted RBP13.15□□□□□ -0.3
CLIP2-203ENST00000395060 GPR34Q9UPC5 381 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 INSL6Q9Y581 213 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 PLXNA2O75051 1894 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 OR2W5A6NFC9 320 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 MCIDASD6RGH6 385 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 APEHP13798 732 aaKnown RBP13.15□□□□□ -0.3
CLIP2-203ENST00000395060 GABRA3P34903 492 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 RAB28P51157 221 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 TAS2R43P59537 309 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 DYRK1AQ13627 763 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 ASPGQ86U10 573 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 LRRC25Q8N386 305 aaPredicted RBP13.15□□□□□ -0.3
CLIP2-203ENST00000395060 EVA1AQ9H8M9 152 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 OR5V1Q9UGF6 321 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 LHX6Q9UPM6 363 aa13.15□□□□□ -0.3
CLIP2-203ENST00000395060 PRR32B1ATL7 298 aa13.15□□□□□ -0.31
CLIP2-203ENST00000395060 PRICKLE3O43900 615 aaPredicted RBP13.15□□□□□ -0.31
CLIP2-203ENST00000395060 SDC3O75056 442 aa13.15□□□□□ -0.31
CLIP2-203ENST00000395060 ZFPL1O95159 310 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms