RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 IER3IP1Q9Y5U9 82 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 NUP210LQ5VU65 1888 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 ARID1BQ8NFD5 2236 aaPredicted RBP12.76□□□□□ -0.37
SNCA-204ENST00000394989 MPDZO75970 2070 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 TMEM265A0A087WTH1 108 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 IL33O95760 270 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 TFP02787 698 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 ADH7P40394 386 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 OR12D2P58182 307 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 RPS4XP62701 263 aaKnown RBP12.76□□□□□ -0.37
SNCA-204ENST00000394989 BTBD16Q32M84 506 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 YIPF7Q8N8F6 280 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 C17orf47Q8NEP4 570 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 OR51L1Q8NGJ5 315 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 ZPLD1Q8TCW7 415 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 SLC2A12Q8TD20 617 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 PMEPA1Q969W9 287 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 RNF31Q96EP0 1072 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 DIRAS2Q96HU8 199 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 ERVMER34-1Q9H9K5 563 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 INPP5EQ9NRR6 644 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 MMACHCQ9Y4U1 282 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 COL5A1P20908 1838 aaPredicted RBP12.76□□□□□ -0.37
SNCA-204ENST00000394989 WDFY4Q6ZS81 3184 aa12.76□□□□□ -0.37
SNCA-204ENST00000394989 RP1P56715 2156 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 K7ESF4 209 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 KRR1Q13601 381 aaKnown RBP12.75□□□□□ -0.37
SNCA-204ENST00000394989 TIGD4Q8IY51 512 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 PRR22Q8IZ63 422 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 SLC43A2Q8N370 569 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 D2HGDHQ8N465 521 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 SPERTQ8NA61 448 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 DEDD2Q8WXF8 326 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 TRIM63Q969Q1 353 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 SLC46A1Q96NT5 459 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 TRIM36Q9NQ86 728 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 COMMD3Q9UBI1 195 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 RABL2BQ9UNT1 228 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 FABP12A6NFH5 140 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 C17orf51A8MQB3 221 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 BCAT2O15382 392 aaPredicted RBP12.75□□□□□ -0.37
SNCA-204ENST00000394989 GALP22466 123 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 AFF3P51826 1226 aaKnown RBP12.75□□□□□ -0.37
SNCA-204ENST00000394989 BIKQ13323 160 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 OR5J2Q8NH18 312 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 AP3S1Q92572 193 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 ZMYND19Q96E35 227 aaPredicted RBP12.75□□□□□ -0.37
SNCA-204ENST00000394989 MVB12AQ96EY5 273 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 DDOQ99489 341 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 NRSN2Q9GZP1 204 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 CABIN1Q9Y6J0 2220 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 A0A1B0GVT2 93 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 CDC14CA4D256 554 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 FAM25AB3EWG3 89 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 FAM25CB3EWG5 89 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 FAM25GB3EWG6 89 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 PLPP2O43688 288 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 RGS9O75916 674 aaPredicted RBP12.75□□□□□ -0.37
SNCA-204ENST00000394989 UTS2O95399 124 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 UBL4AP11441 157 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 GLB1P16278 677 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 FAM27D1Q5T7N8 215 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 ATG4DQ86TL0 474 aaPredicted RBP12.75□□□□□ -0.37
SNCA-204ENST00000394989 GHDCQ8N2G8 530 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 FAM98AQ8NCA5 519 aaKnown RBP12.75□□□□□ -0.37
SNCA-204ENST00000394989 PHOSPHO1Q8TCT1 267 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 PGLYRP3Q96LB9 341 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 NDC1Q9BTX1 674 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 TTTY10Q9BZA0 68 aa12.75□□□□□ -0.37
SNCA-204ENST00000394989 TCRBV16S1A1N1A0A5B0 115 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 C4orf47A7E2U8 309 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 J3QLW9 94 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 MAGEB4O15481 346 aaPredicted RBP12.74□□□□□ -0.37
SNCA-204ENST00000394989 HPGDSO60760 199 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 IFNGP01579 166 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 MT-ND5P03915 603 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 CSF3P09919 207 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 PSKH1P11801 424 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 ZNF19P17023 458 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 RORAP35398 523 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 EGR4Q05215 589 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 PLXDC1Q8IUK5 500 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 C9orf40Q8IXQ3 194 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 NPEPL1Q8NDH3 523 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 SLC7A6Q92536 515 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 SHDQ96IW2 340 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 LCORQ96JN0 433 aaPredicted RBP12.74□□□□□ -0.37
SNCA-204ENST00000394989 SLC41A2Q96JW4 573 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 ADOQ96SZ5 270 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 NMNAT3Q96T66 252 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 NUDT9Q9BW91 350 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 CCDC86Q9H6F5 360 aaKnown RBP12.74□□□□□ -0.37
SNCA-204ENST00000394989 NRIP3Q9NQ35 241 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 SEMA5BQ9P283 1151 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 GRIP1Q9Y3R0 1128 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 FRG2CA6NGY1 282 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 SOX1O00570 391 aaPredicted RBP12.74□□□□□ -0.37
SNCA-204ENST00000394989 DUX1O43812 170 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 OR7A10O76100 309 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 MYL9P24844 172 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms