RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 PGCP20142 388 aa14.55□□□□□ -0.08
SMARCD1-202ENST00000394963 NUDT1P36639 197 aa14.55□□□□□ -0.08
SMARCD1-202ENST00000394963 MLLT11Q13015 90 aaPredicted RBP14.55□□□□□ -0.08
SMARCD1-202ENST00000394963 QPRTQ15274 297 aa14.55□□□□□ -0.08
SMARCD1-202ENST00000394963 PM20D2Q8IYS1 436 aa14.55□□□□□ -0.08
SMARCD1-202ENST00000394963 ALDH16A1Q8IZ83 802 aa14.55□□□□□ -0.08
SMARCD1-202ENST00000394963 CADM4Q8NFZ8 388 aa14.55□□□□□ -0.08
SMARCD1-202ENST00000394963 PTPMT1Q8WUK0 201 aaPredicted RBP14.55□□□□□ -0.08
SMARCD1-202ENST00000394963 THAP4Q8WY91 577 aa14.55□□□□□ -0.08
SMARCD1-202ENST00000394963 ARRDC1-AS1Q9H2J1 176 aa14.55□□□□□ -0.08
SMARCD1-202ENST00000394963 SIGLEC7Q9Y286 467 aa14.55□□□□□ -0.08
SMARCD1-202ENST00000394963 LILRA5A6NI73 299 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 METTL15A6NJ78 407 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 A6NL46 340 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 LIMS1P48059 325 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 GALK2Q01415 458 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 ACSM3Q53FZ2 586 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 NXNL2Q5VZ03 156 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 PLET1Q6UQ28 207 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 SLC38A9Q8NBW4 561 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 OR10H5Q8NGA6 315 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 R4GN57 208 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 KIF26BQ2KJY2 2108 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 SHISA7A6NL88 538 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 DSCR3O14972 297 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 OR2J2O76002 312 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 ZNF823P16415 610 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 BCAP31P51572 246 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 RPS18P62269 152 aaKnown RBP14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 DCDP81605 110 aaKnown RBP14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 RHAGQ02094 409 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 MEP1BQ16820 701 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 RAET1LQ5VY80 246 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 WBP2NLQ6ICG8 309 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 MZT2AQ6P582 158 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 METAP1DQ6UB28 335 aaPredicted RBP14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 LRRC69Q6ZNQ3 347 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 OR5B2Q96R09 309 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 CDCA4Q9BXL8 241 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 TCF7L1Q9HCS4 588 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 RXFP3Q9NSD7 469 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 TRAV6A0A075B6T7 132 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 A0A1W2PNR3 127 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 NPIPA5E9PKD4 350 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 SSX4O60224 188 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 SLITRK5O94991 958 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 NGFRP08138 427 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 RFC3P40938 356 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 PRKXP51817 358 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 CTBP2P56545 445 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 POU3F1Q03052 451 aaPredicted RBP14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 ELAVL1Q15717 326 aaKnown RBP14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 GARNL3Q5VVW2 1013 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 OR7E24Q6IFN5 339 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 CNIH2Q6PI25 160 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 LINC00346Q8IVM7 164 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 Q8N402 240 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 RFLNBQ8N5W9 214 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 OR5J2Q8NH18 312 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 ZPLD1Q8TCW7 415 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 OR14A2Q96R54 314 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 ACOXLQ9NUZ1 547 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 NPIPA1Q9UND3 350 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 RASD1Q9Y272 281 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 ALPK3Q96L96 1907 aa14.54□□□□□ -0.08
SMARCD1-202ENST00000394963 ABCD3P28288 659 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 ZNF41P51814 821 aaPredicted RBP14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 SCN1BQ07699 218 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 VASNQ6EMK4 673 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 KRT77Q7Z794 578 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 APOBEC4Q8WW27 367 aaKnown RBP14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 PTP4A1Q93096 173 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 SLC46A1Q96NT5 459 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 ELL3Q9HB65 397 aaPredicted RBP14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 QPCTLQ9NXS2 382 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 PCNX1Q96RV3 2341 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 GABRB1P18505 474 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 GPR3P46089 330 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 CD83Q01151 205 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 OCLNQ16625 522 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 LINGO2Q7L985 606 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 SLC35F2Q8IXU6 374 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 CELF2-AS1Q8N7Q2 184 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 ALG12Q9BV10 488 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 A0A1W2PPL8 197 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 A0A1W2PQ09 198 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 MEN1O00255 615 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 EEF1E1O43324 174 aaKnown RBP14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 SUSD5O60279 629 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 SBK2P0C263 348 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 HTR1FP30939 366 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 KRR1Q13601 381 aaKnown RBP14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 COL28A1Q2UY09 1125 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 HEPHL1Q6MZM0 1159 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 ZCCHC12Q6PEW1 402 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 ZNF613Q6PF04 617 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 LRRN1Q6UXK5 716 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 FGD2Q7Z6J4 655 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 NRARPQ7Z6K4 114 aa14.53□□□□□ -0.08
SMARCD1-202ENST00000394963 MSANTD3Q96H12 275 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms