RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 FGF9P31371 208 aaPredicted RBP13.73□□□□□ -0.21
GPC3-202ENST00000394299 ACSM1Q08AH1 577 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 TP53I3Q53FA7 332 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 DPY19L2P2Q6ZN68 376 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 C8orf44Q96CB5 159 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 DDOQ99489 341 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 SMAD5Q99717 465 aaKnown RBP13.73□□□□□ -0.21
GPC3-202ENST00000394299 MMP25Q9NPA2 562 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 TBCCD1Q9NVR7 557 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 GSTK1Q9Y2Q3 226 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 H7C1C5 153 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 PSMD9O00233 223 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 SSX4O60224 188 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 SELENOFO60613 162 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 PPM1BO75688 479 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 HEXBP07686 556 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 GRPRP30550 384 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 PYCR1P32322 319 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 GRK6P43250 576 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 LCN6P62502 163 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 RPS4XP62701 263 aaKnown RBP13.72□□□□□ -0.21
GPC3-202ENST00000394299 RNF4P78317 190 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 WDR5BQ86VZ2 330 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 ZNF441Q8N8Z8 693 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 APCDD1LQ8NCL9 501 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 NEIL3Q8TAT5 605 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 DUSP19Q8WTR2 217 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 NPAS1Q99742 590 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 TBL1XR1Q9BZK7 514 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 LAT2Q9GZY6 243 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 ZNF229Q9UJW7 825 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 MRTO4Q9UKD2 239 aaKnown RBP13.72□□□□□ -0.21
GPC3-202ENST00000394299 V9GYH0 126 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 LAMTOR5O43504 91 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 CDC40O60508 579 aaKnown RBP eCLIP13.72□□□□□ -0.21
GPC3-202ENST00000394299 HLA-DPB1P04440 258 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 ETV6P41212 452 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 CTXN1P60606 82 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 ZNF79Q15937 498 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 PHF19Q5T6S3 580 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 ANKRD37Q7Z713 158 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 NR2C2APQ86WQ0 139 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 OR13C5Q8NGS8 318 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 OR6K6Q8NGW6 343 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 LPAR4Q99677 370 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 ADAM19Q9H013 955 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 TIGARQ9NQ88 270 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 EXOSC3Q9NQT5 275 aaKnown RBP13.72□□□□□ -0.21
GPC3-202ENST00000394299 COMMD3Q9UBI1 195 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 COPS3Q9UNS2 423 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 CMAHPQ9Y471 501 aa13.72□□□□□ -0.21
GPC3-202ENST00000394299 LINC00854A0A1B0GVQ3 168 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 B4DXG7 233 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 PNMTP11086 282 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 FBXW4P57775 412 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 DCAF7P61962 342 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 ZXDAP98168 799 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 ACY1Q03154 408 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 CARTPTQ16568 116 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 BAK1Q16611 211 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 ZNF181Q2M3W8 571 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 OTPQ5XKR4 325 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 LEG1Q6P5S2 330 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 FAM199XQ6PEV8 388 aaPredicted RBP13.71□□□□□ -0.21
GPC3-202ENST00000394299 ZNF554Q86TJ5 538 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 OR8H2Q8N162 312 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 OR4D9Q8NGE8 314 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 CEP76Q8TAP6 659 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 RPRD1BQ9NQG5 326 aaKnown RBP13.71□□□□□ -0.21
GPC3-202ENST00000394299 RARRES3Q9UL19 164 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 SRPK3Q9UPE1 567 aa13.71□□□□□ -0.21
GPC3-202ENST00000394299 CCDC163A0A0D9SF12 145 aa13.71□□□□□ -0.22
GPC3-202ENST00000394299 IQCMA0A1B0GVH7 501 aa13.71□□□□□ -0.22
GPC3-202ENST00000394299 A0A1W2PPK0 400 aa13.71□□□□□ -0.22
GPC3-202ENST00000394299 ALG1L2C9J202 215 aa13.71□□□□□ -0.22
GPC3-202ENST00000394299 DCTN6O00399 190 aa13.71□□□□□ -0.22
GPC3-202ENST00000394299 TO15178 435 aa13.71□□□□□ -0.22
GPC3-202ENST00000394299 ASAH2BP0C7U1 165 aa13.71□□□□□ -0.22
GPC3-202ENST00000394299 PNLIPP16233 465 aa13.71□□□□□ -0.22
GPC3-202ENST00000394299 SPI1P17947 270 aa13.71□□□□□ -0.22
GPC3-202ENST00000394299 SHC1P29353 583 aa13.71□□□□□ -0.22
GPC3-202ENST00000394299 HOXA6P31267 233 aa13.71□□□□□ -0.22
GPC3-202ENST00000394299 VASH1Q7L8A9 365 aaPredicted RBP13.71□□□□□ -0.22
GPC3-202ENST00000394299 RABEPKQ7Z6M1 372 aa13.71□□□□□ -0.22
GPC3-202ENST00000394299 CADM3Q8N126 398 aa13.71□□□□□ -0.22
GPC3-202ENST00000394299 LRRC75AQ8NAA5 344 aa13.71□□□□□ -0.22
GPC3-202ENST00000394299 ZNF511Q8NB15 262 aa13.71□□□□□ -0.22
GPC3-202ENST00000394299 SLC25A36Q96CQ1 311 aa13.71□□□□□ -0.22
GPC3-202ENST00000394299 HAO2Q9NYQ3 351 aa13.71□□□□□ -0.22
GPC3-202ENST00000394299 TOX3O15405 576 aaPredicted RBP13.7□□□□□ -0.22
GPC3-202ENST00000394299 FADS1O60427 444 aa13.7□□□□□ -0.22
GPC3-202ENST00000394299 MT-ND5P03915 603 aa13.7□□□□□ -0.22
GPC3-202ENST00000394299 RPL18Q07020 188 aaKnown RBP13.7□□□□□ -0.22
GPC3-202ENST00000394299 PON3Q15166 354 aa13.7□□□□□ -0.22
GPC3-202ENST00000394299 ALG10Q5BKT4 473 aa13.7□□□□□ -0.22
GPC3-202ENST00000394299 YOD1Q5VVQ6 348 aaPredicted RBP13.7□□□□□ -0.22
GPC3-202ENST00000394299 BICRALQ6AI39 1079 aa13.7□□□□□ -0.22
GPC3-202ENST00000394299 MAMSTRQ6ZN01 415 aa13.7□□□□□ -0.22
GPC3-202ENST00000394299 NFAM1Q8NET5 270 aaPredicted RBP13.7□□□□□ -0.22
GPC3-202ENST00000394299 IFI44Q8TCB0 444 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms