RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 ALDOCP09972 364 aaKnown RBP15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 NR2F1P10589 423 aa15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 CXCR1P25024 350 aa15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 MST1LQ2TV78 715 aa15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 AAED1Q7RTV5 226 aa15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 HMGN2P46Q86SG4 172 aa15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 FAM169BQ8N8A8 192 aa15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 NANOS1Q8WY41 292 aaKnown RBP15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 DNAJA3Q96EY1 480 aa15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 OR52E6Q96RD3 313 aa15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 C1QTNF6Q9BXI9 259 aa15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 BEX2Q9BXY8 128 aa15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 MYOZ1Q9NP98 299 aaPredicted RBP15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 CALML5Q9NZT1 146 aa15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 FBXO9Q9UK97 447 aaPredicted RBP15.28■□□□□ 0.04
SNRPA1-202ENST00000394082 PHF1O43189 567 aaPredicted RBP15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 PDE5AO76074 875 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 C1QCP02747 245 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 IGHV4-31P0DP07 118 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 ACAA2P42765 397 aaKnown RBP15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 GZMKP49863 264 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 UFM1P61960 85 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 LSM11P83369 360 aaKnown RBP eCLIP15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 STX3Q13277 289 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 CEACAM7Q14002 265 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 KRT71Q3SY84 523 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 LIN52Q52LA3 116 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 TNFAIP8L3Q5GJ75 292 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 RNF220Q5VTB9 566 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 WBP2NLQ6ICG8 309 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 ZNF621Q6ZSS3 439 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 TMEM99Q8N816 258 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 ANKK1Q8NFD2 765 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 MAGEE2Q8TD90 523 aaPredicted RBP15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 ZNF385AQ96PM9 386 aaKnown RBP15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 KATNB1Q9BVA0 655 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 MANSC1Q9H8J5 431 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 TMEM45AQ9NWC5 275 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 P2RX2Q9UBL9 471 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 GPR45Q9Y5Y3 372 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 FKBP7Q9Y680 259 aa15.27■□□□□ 0.04
SNRPA1-202ENST00000394082 ARFGEF3Q5TH69 2177 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 ARPC4-TTLL3A0A0A6YYG9 625 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 A8MVM7 634 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 ATP6V1G2-DDX39BF2Z307 99 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 NPIPB7O75200 414 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 AKR7A3O95154 331 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 IL6P05231 212 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 ZCCHC18P0CG32 403 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 HOXB1P14653 301 aaPredicted RBP15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 IL12AP29459 219 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 PDLIM4P50479 330 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 P2RY4P51582 365 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 MVDP53602 400 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 MAPK11Q15759 364 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 C9orf135Q5VTT2 229 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 TMEM225Q6GV28 225 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 HTRA1Q92743 480 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 SLC35B4Q969S0 331 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 TAPBPLQ9BX59 468 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 THUMPD1Q9NXG2 353 aaKnown RBP15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 CRNNQ9UBG3 495 aaPredicted RBP15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 MOKQ9UQ07 419 aa15.26■□□□□ 0.03
SNRPA1-202ENST00000394082 ZNF587BE7ETH6 402 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 SDHDO14521 159 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 RFXANKO14593 260 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 LMX1BO60663 402 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 BGNP21810 368 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 CDKN2CP42773 168 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 CRISP3P54108 245 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 SH3BGRP55822 239 aaPredicted RBP15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 COPZ1P61923 177 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 SNRPD2P62316 118 aaKnown RBP15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 OR7A5Q15622 319 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 EFNB3Q15768 340 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 COX20Q5RI15 118 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 CREB3L2Q70SY1 520 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 OR52P1PQ8NH57 321 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 STK35Q8TDR2 534 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 AURKBQ96GD4 344 aaPredicted RBP15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 SLC38A2Q96QD8 506 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 ZBTB18Q99592 522 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 LINC00470Q9BZP3 86 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 SHARPINQ9H0F6 387 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 ARMC7Q9H6L4 198 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 CA10Q9NS85 328 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 PNPOQ9NVS9 261 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 RLIMQ9NVW2 624 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 RASD1Q9Y272 281 aa15.25■□□□□ 0.03
SNRPA1-202ENST00000394082 IGHV1-18A0A0C4DH31 117 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 LOC390937A0A1W2PQ73 354 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 TRPC5OSA6NMA1 111 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 B9A039 149 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 HDAC3O15379 428 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 FZD7O75084 574 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 CRYAAP02489 173 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 TFPTP0C1Z6 253 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 SERPINF1P36955 418 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 NR4A2P43354 598 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 BST1Q10588 318 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms