RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 KDM4BO94953 1096 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 IL5P05113 134 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 DUX4L2P0CJ85 424 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 DUX4L3P0CJ86 424 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 DUX4L4P0CJ87 422 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 DUX4L5P0CJ88 424 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 DUX4L6P0CJ89 424 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 DUX4L7P0CJ90 424 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 PRR23D2P0DMB1 279 aaPredicted RBP10.25□□□□□ -0.77
CUX1-204ENST00000393824 TYRP1P17643 537 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 SDHBP21912 280 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 MAPK3P27361 379 aaPredicted RBP10.25□□□□□ -0.77
CUX1-204ENST00000393824 RAB13P51153 203 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 MECP2P51608 486 aaKnown RBP10.25□□□□□ -0.77
CUX1-204ENST00000393824 TBPL1P62380 186 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 RNASE12Q5GAN4 147 aaKnown RBP10.25□□□□□ -0.77
CUX1-204ENST00000393824 FAM27D1Q5T7N8 215 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 SFRP4Q6FHJ7 346 aaPredicted RBP10.25□□□□□ -0.77
CUX1-204ENST00000393824 C6orf120Q7Z4R8 191 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 COMTD1Q86VU5 262 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 MEIOBQ8N635 442 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 ARL6IP6Q8N6S5 226 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 CADM4Q8NFZ8 388 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 SLC5A11Q8WWX8 675 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 ORAI1Q96D31 301 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 OR2M4Q96R27 311 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 GSDMCQ9BYG8 508 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 SEMA4CQ9C0C4 833 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 TINAGL1Q9GZM7 467 aaPredicted RBP10.25□□□□□ -0.77
CUX1-204ENST00000393824 DDX31Q9H8H2 851 aaKnown RBP10.25□□□□□ -0.77
CUX1-204ENST00000393824 SLC6A20Q9NP91 592 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 AKAP7Q9P0M2 348 aaPredicted RBP10.25□□□□□ -0.77
CUX1-204ENST00000393824 DUX4Q9UBX2 424 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 EPHA6Q9UF33 1036 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 LRP4O75096 1905 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 A0A087WUU8 490 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 M0R3H8 397 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 LAMTOR5O43504 91 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 HOXC4P09017 264 aaPredicted RBP10.25□□□□□ -0.77
CUX1-204ENST00000393824 ATP6V1E1P36543 226 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 RABIFP47224 123 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 MANFP55145 182 aaKnown RBP10.25□□□□□ -0.77
CUX1-204ENST00000393824 SIM1P81133 766 aaPredicted RBP10.25□□□□□ -0.77
CUX1-204ENST00000393824 DEFA5Q01523 94 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 MLC1Q15049 377 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 ZNF626Q68DY1 528 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 ACBD7Q8N6N7 88 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 SMPDL3AQ92484 453 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 TFGQ92734 400 aaPredicted RBP10.25□□□□□ -0.77
CUX1-204ENST00000393824 RAB8BQ92930 207 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 PNPLA2Q96AD5 504 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 C10orf90Q96M02 699 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 CMTM3Q96MX0 182 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 CAMK1GQ96NX5 476 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 TREX2Q9BQ50 279 aaPredicted RBP10.25□□□□□ -0.77
CUX1-204ENST00000393824 MENTQ9BUN1 341 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 ARL6Q9H0F7 186 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 OR10A4Q9H209 315 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 ANKRD19PQ9H560 264 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 TRIM36Q9NQ86 728 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 BIN3Q9NQY0 253 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 P2RX2Q9UBL9 471 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 SH2B3Q9UQQ2 575 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 ASF1AQ9Y294 204 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 PI4KAP42356 2102 aa10.25□□□□□ -0.77
CUX1-204ENST00000393824 GPR89AB7ZAQ6 455 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 TEX46H3BTG2 121 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 ARPC5O15511 151 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 CREBL2O60519 120 aaPredicted RBP10.24□□□□□ -0.77
CUX1-204ENST00000393824 GLAP06280 429 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 FABP1P07148 127 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 GPR89BP0CG08 455 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 RAB3BP20337 219 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 CD38P28907 300 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 RORAP35398 523 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 ACTR1BP42025 376 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 RAD52P43351 418 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 ACTR1AP61163 376 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 YPEL5P62699 121 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 MICBQ29980 383 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 UAP1L1Q3KQV9 507 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 RAB11FIP2Q7L804 512 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 CEACAM19Q7Z692 300 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 JAZF1Q86VZ6 243 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 SIRT6Q8N6T7 355 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 PXT1Q8NFP0 134 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 OR9A1PQ8NGU1 263 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 OR6K3Q8NGY3 331 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 OR5W2Q8NH69 310 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 ABHD4Q8TB40 342 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 THEM6Q8WUY1 208 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 KLHDC7BQ96G42 594 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 SPACA7Q96KW9 195 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 TIMM29Q9BSF4 260 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 TEX12Q9BXU0 123 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 DPEP2Q9H4A9 486 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 GPN1Q9HCN4 374 aaPredicted RBP10.24□□□□□ -0.77
CUX1-204ENST00000393824 BCL2L10Q9HD36 194 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 EQTNQ9NQ60 294 aa10.24□□□□□ -0.77
CUX1-204ENST00000393824 CTPS2Q9NRF8 586 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms