RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 RFX2P48378 723 aa23.35■■□□□ 1.33
SMARCD3-203ENST00000392811 ARRB1P49407 418 aaPredicted RBP23.35■■□□□ 1.33
SMARCD3-203ENST00000392811 EIF2B2P49770 351 aaKnown RBP23.35■■□□□ 1.33
SMARCD3-203ENST00000392811 SCN1BQ07699 218 aa23.35■■□□□ 1.33
SMARCD3-203ENST00000392811 FAM27D1Q5T7N8 215 aa23.35■■□□□ 1.33
SMARCD3-203ENST00000392811 SLC35F2Q8IXU6 374 aa23.35■■□□□ 1.33
SMARCD3-203ENST00000392811 MMP25Q9NPA2 562 aa23.35■■□□□ 1.33
SMARCD3-203ENST00000392811 NANSQ9NR45 359 aa23.35■■□□□ 1.33
SMARCD3-203ENST00000392811 CTSFQ9UBX1 484 aa23.35■■□□□ 1.33
SMARCD3-203ENST00000392811 MPDZO75970 2070 aa23.34■■□□□ 1.33
SMARCD3-203ENST00000392811 LINC00854A0A1B0GVQ3 168 aa23.34■■□□□ 1.33
SMARCD3-203ENST00000392811 GMFGO60234 142 aa23.34■■□□□ 1.33
SMARCD3-203ENST00000392811 TSPAN2O60636 221 aa23.34■■□□□ 1.33
SMARCD3-203ENST00000392811 TACR3P29371 465 aa23.34■■□□□ 1.33
SMARCD3-203ENST00000392811 YOD1Q5VVQ6 348 aaPredicted RBP23.34■■□□□ 1.33
SMARCD3-203ENST00000392811 MZT2AQ6P582 158 aa23.34■■□□□ 1.33
SMARCD3-203ENST00000392811 C7orf57Q8NEG2 295 aa23.34■■□□□ 1.33
SMARCD3-203ENST00000392811 OR1N1Q8NGS0 311 aa23.34■■□□□ 1.33
SMARCD3-203ENST00000392811 SOSTQ9BQB4 213 aa23.34■■□□□ 1.33
SMARCD3-203ENST00000392811 COPS7AQ9UBW8 275 aa23.34■■□□□ 1.33
SMARCD3-203ENST00000392811 ST6GALNAC2Q9UJ37 374 aa23.34■■□□□ 1.33
SMARCD3-203ENST00000392811 CABIN1Q9Y6J0 2220 aa23.34■■□□□ 1.33
SMARCD3-203ENST00000392811 TEX13CA0A0J9YWL9 993 aa23.33■■□□□ 1.33
SMARCD3-203ENST00000392811 C17orf51A8MQB3 221 aa23.33■■□□□ 1.33
SMARCD3-203ENST00000392811 TO15178 435 aa23.33■■□□□ 1.33
SMARCD3-203ENST00000392811 SERPINI2O75830 405 aa23.33■■□□□ 1.33
SMARCD3-203ENST00000392811 LCN1P31025 176 aa23.33■■□□□ 1.33
SMARCD3-203ENST00000392811 LTBQ06643 244 aa23.33■■□□□ 1.33
SMARCD3-203ENST00000392811 TSSK4Q6SA08 328 aa23.33■■□□□ 1.33
SMARCD3-203ENST00000392811 LANCL3Q6ZV70 420 aa23.33■■□□□ 1.33
SMARCD3-203ENST00000392811 TMPRSS9Q7Z410 1059 aa23.33■■□□□ 1.33
SMARCD3-203ENST00000392811 CEACAM19Q7Z692 300 aa23.33■■□□□ 1.33
SMARCD3-203ENST00000392811 MARCH3Q86UD3 253 aa23.33■■□□□ 1.33
SMARCD3-203ENST00000392811 LRRC75AQ8NAA5 344 aa23.33■■□□□ 1.33
SMARCD3-203ENST00000392811 IL17RDQ8NFM7 739 aa23.33■■□□□ 1.33
SMARCD3-203ENST00000392811 Q96M85 177 aa23.33■■□□□ 1.33
SMARCD3-203ENST00000392811 NEDD4LQ96PU5 975 aa23.33■■□□□ 1.33
SMARCD3-203ENST00000392811 C4orf47A7E2U8 309 aa23.33■■□□□ 1.32
SMARCD3-203ENST00000392811 HCRTR2O43614 444 aa23.33■■□□□ 1.32
SMARCD3-203ENST00000392811 NRG3P56975 720 aa23.33■■□□□ 1.32
SMARCD3-203ENST00000392811 PLCXD2Q0VAA5 305 aa23.33■■□□□ 1.32
SMARCD3-203ENST00000392811 SLC35D3Q5M8T2 416 aa23.33■■□□□ 1.32
SMARCD3-203ENST00000392811 SHISA6Q6ZSJ9 500 aa23.33■■□□□ 1.32
SMARCD3-203ENST00000392811 GHSRQ92847 366 aa23.33■■□□□ 1.32
SMARCD3-203ENST00000392811 KTI12Q96EK9 354 aaPredicted RBP23.33■■□□□ 1.32
SMARCD3-203ENST00000392811 CDX2Q99626 313 aaPredicted RBP23.33■■□□□ 1.32
SMARCD3-203ENST00000392811 ADAM19Q9H013 955 aa23.33■■□□□ 1.32
SMARCD3-203ENST00000392811 MALT1Q9UDY8 824 aa23.33■■□□□ 1.32
SMARCD3-203ENST00000392811 ATXN7L1Q9ULK2 861 aaPredicted RBP23.33■■□□□ 1.32
SMARCD3-203ENST00000392811 SELENOFO60613 162 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 SC5DO75845 299 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 ASAH2BP0C7U1 165 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 APEX1P27695 318 aaKnown RBP23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 SLC6A8P48029 635 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 EVX1P49640 407 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 FOXL2P58012 376 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 ACTA2P62736 377 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 ACTG2P63267 376 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 LEG1Q6P5S2 330 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 COX15Q7KZN9 410 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 SLC29A4Q7RTT9 530 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 SYS1Q8N2H4 156 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 OR6K6Q8NGW6 343 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 PELI1Q96FA3 418 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 PPP1R3EQ9H7J1 279 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 CD14P08571 375 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 CDKN2AP42771 156 aaKnown RBP23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 ASAH1Q13510 395 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 CDONQ4KMG0 1287 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 ALG10Q5BKT4 473 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 IDNKQ5T6J7 187 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 FAM122BQ7Z309 247 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 PXKQ7Z7A4 578 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 OMA1Q96E52 524 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 CCDC86Q9H6F5 360 aaKnown RBP23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 SLC22A11Q9NSA0 550 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 PCDHGB7Q9Y5F8 929 aa23.32■■□□□ 1.32
SMARCD3-203ENST00000392811 SEC14L5O43304 696 aa23.31■■□□□ 1.32
SMARCD3-203ENST00000392811 UQCRC1P31930 480 aa23.31■■□□□ 1.32
SMARCD3-203ENST00000392811 TPTEP56180 551 aa23.31■■□□□ 1.32
SMARCD3-203ENST00000392811 SELENBP1Q13228 472 aa23.31■■□□□ 1.32
SMARCD3-203ENST00000392811 LYPD4Q6UWN0 246 aa23.31■■□□□ 1.32
SMARCD3-203ENST00000392811 ZNF574Q6ZN55 896 aaPredicted RBP23.31■■□□□ 1.32
SMARCD3-203ENST00000392811 LPAR4Q99677 370 aa23.31■■□□□ 1.32
SMARCD3-203ENST00000392811 C12orf10Q9HB07 376 aa23.31■■□□□ 1.32
SMARCD3-203ENST00000392811 COPS3Q9UNS2 423 aa23.31■■□□□ 1.32
SMARCD3-203ENST00000392811 A0A1W2PRG6 482 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 ALG1L2C9J202 215 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 OGG1O15527 345 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 NDUFB5O43674 189 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 ABCD3P28288 659 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 CTXN1P60606 82 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 IL10RAQ13651 578 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 P2RY14Q15391 338 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 TOMM34Q15785 309 aaPredicted RBP23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 ACSM3Q53FZ2 586 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 HBMQ6B0K9 141 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 TMEM71Q6P5X7 295 aa23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 METAP1DQ6UB28 335 aaPredicted RBP23.3■■□□□ 1.32
SMARCD3-203ENST00000392811 ZNF441Q8N8Z8 693 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms