RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 ELOVL3Q9HB03 270 aa15.19■□□□□ 0.02
SNX9-201ENST00000392185 DOCK8Q8NF50 2099 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 ACOD1A6NK06 481 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 PATE3B3GLJ2 98 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 SYT7O43581 403 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 HOXC4P09017 264 aaPredicted RBP15.18■□□□□ 0.02
SNX9-201ENST00000392185 CDK4P11802 303 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 GNG2P59768 71 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 COL28A1Q2UY09 1125 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 C7orf34Q96L11 122 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 POLE3Q9NRF9 147 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 GJE1A6NN92 205 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 INMT-MINDY4F8WBC2 141 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 UCHL1P09936 223 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 EMDP50402 254 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 C16orf47Q6ZP98 133 aaPredicted RBP15.18■□□□□ 0.02
SNX9-201ENST00000392185 ZSCAN1Q8NBB4 408 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 TRMT10AQ8TBZ6 339 aaKnown RBP15.18■□□□□ 0.02
SNX9-201ENST00000392185 GPR148Q8TDV2 347 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 ITFG2Q969R8 447 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 GPATCH2Q9NW75 528 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 TGFBR2P37173 567 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 RPS27P42677 84 aaKnown RBP15.18■□□□□ 0.02
SNX9-201ENST00000392185 TBC1D25Q3MII6 688 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 UBE3DQ7Z6J8 389 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 GPR32P1Q8NGA4 272 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 OR52I1Q8NGK6 324 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 PCED1AQ9H1Q7 454 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 PCDHGB6Q9Y5F9 930 aa15.18■□□□□ 0.02
SNX9-201ENST00000392185 PRAMEF25A6NGN4 478 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 CENPBD1B2RD01 187 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 RPS25P62851 125 aaKnown RBP15.17■□□□□ 0.02
SNX9-201ENST00000392185 NXNL2Q5VZ03 156 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 TMPPEQ6ZT21 453 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 C1orf210Q8IVY1 113 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 OR51B6Q9H340 312 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 SYNPO2LQ9H987 977 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 VSX1Q9NZR4 365 aaPredicted RBP15.17■□□□□ 0.02
SNX9-201ENST00000392185 BDP1A6H8Y1 2624 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 TRAV36DV7A0A075B6V5 113 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 HYAL3O43820 417 aaPredicted RBP15.17■□□□□ 0.02
SNX9-201ENST00000392185 RBBP9O75884 186 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 MPLP40238 635 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 GPR3P46089 330 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 PCBP4P57723 403 aaKnown RBP15.17■□□□□ 0.02
SNX9-201ENST00000392185 ZXDCQ2QGD7 858 aaPredicted RBP15.17■□□□□ 0.02
SNX9-201ENST00000392185 CNIH2Q6PI25 160 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 ULBP2Q9BZM5 246 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 NLKQ9UBE8 527 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 GRIP1Q9Y3R0 1128 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 ZNF701M0R085 212 aaPredicted RBP15.17■□□□□ 0.02
SNX9-201ENST00000392185 NCR1O76036 304 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 CD63P08962 238 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 HNRNPFP52597 415 aaKnown RBP15.17■□□□□ 0.02
SNX9-201ENST00000392185 BIDP55957 195 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 SNTB2Q13425 540 aaKnown RBP15.17■□□□□ 0.02
SNX9-201ENST00000392185 KIRREL2Q6UWL6 708 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 ZNF620Q6ZNG0 422 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 SMAP2Q8WU79 429 aaPredicted RBP15.17■□□□□ 0.02
SNX9-201ENST00000392185 EDEM2Q9BV94 578 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 IRF2BPLQ9H1B7 796 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 ANKRD19PQ9H560 264 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 RASD1Q9Y272 281 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 TMEM269A0A1B0GVZ9 245 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 OR6C70A6NIJ9 312 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 PHYHO14832 338 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 OR2J2O76002 312 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 S100GP29377 79 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 MAP2K3P46734 347 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 ALDH3B2P48448 385 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 C1orf140Q5VVS0 124 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 CPEB2Q7Z5Q1 589 aaKnown RBP15.17■□□□□ 0.02
SNX9-201ENST00000392185 LINC00346Q8IVM7 164 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 NECAB3Q96P71 396 aaPredicted RBP15.17■□□□□ 0.02
SNX9-201ENST00000392185 TSSK2Q96PF2 358 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 NUDT9Q9BW91 350 aa15.17■□□□□ 0.02
SNX9-201ENST00000392185 A8MVM7 634 aa15.16■□□□□ 0.02
SNX9-201ENST00000392185 ZNF593O00488 134 aaPredicted RBP15.16■□□□□ 0.02
SNX9-201ENST00000392185 SLC19A2O60779 497 aa15.16■□□□□ 0.02
SNX9-201ENST00000392185 AKR7A3O95154 331 aa15.16■□□□□ 0.02
SNX9-201ENST00000392185 CT62P0C5K7 136 aa15.16■□□□□ 0.02
SNX9-201ENST00000392185 GTF2F2P13984 249 aa15.16■□□□□ 0.02
SNX9-201ENST00000392185 LRRC56Q8IYG6 542 aaPredicted RBP15.16■□□□□ 0.02
SNX9-201ENST00000392185 GHSRQ92847 366 aa15.16■□□□□ 0.02
SNX9-201ENST00000392185 UTP23Q9BRU9 249 aaKnown RBP15.16■□□□□ 0.02
SNX9-201ENST00000392185 SIRT3Q9NTG7 399 aaPredicted RBP15.16■□□□□ 0.02
SNX9-201ENST00000392185 SH3BGRL2Q9UJC5 107 aa15.16■□□□□ 0.02
SNX9-201ENST00000392185 GPR55Q9Y2T6 319 aaPredicted RBP15.16■□□□□ 0.02
SNX9-201ENST00000392185 LOXL2Q9Y4K0 774 aa15.16■□□□□ 0.02
SNX9-201ENST00000392185 CDHR4A6H8M9 788 aa15.16■□□□□ 0.02
SNX9-201ENST00000392185 SHISA7A6NL88 538 aa15.16■□□□□ 0.02
SNX9-201ENST00000392185 M0R082 166 aa15.16■□□□□ 0.02
SNX9-201ENST00000392185 MAGEB4O15481 346 aaPredicted RBP15.16■□□□□ 0.02
SNX9-201ENST00000392185 CD79AP11912 226 aa15.16■□□□□ 0.02
SNX9-201ENST00000392185 EPHA8P29322 1005 aaPredicted RBP15.16■□□□□ 0.02
SNX9-201ENST00000392185 LTBRP36941 435 aa15.16■□□□□ 0.02
SNX9-201ENST00000392185 AP2S1P53680 142 aaPredicted RBP15.16■□□□□ 0.02
SNX9-201ENST00000392185 CLDN17P56750 224 aa15.16■□□□□ 0.02
SNX9-201ENST00000392185 CSNK2A1P68400 391 aaPredicted RBP15.16■□□□□ 0.02
SNX9-201ENST00000392185 FAM69AQ5T7M9 428 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms