RNA–Protein interactions for RNA: ENST00000390617.2

IGHV3-35-201, Transcript of immunoglobulin heavy variable 3-35 (non-functional), humanhuman

APPRIS P1 BASIC

Gene IGHV3-35, Length 366 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-35-201ENST00000390617 CIB4A0PJX0 185 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 HNRNPCL2B2RXH8 293 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 HNRNPCL3B7ZW38 293 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 E7EQL1 145 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 AP3D1O14617 1153 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 SSX4O60224 188 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 HNRNPCL1O60812 293 aaKnown RBP13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 EDF1O60869 148 aaKnown RBP13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 IFNA2P01563 188 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 VIMP08670 466 aaKnown RBP13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 GKN3PP0CG01 181 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 HNRNPCL4P0DMR1 293 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 PPIBP23284 216 aaKnown RBP13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 HTR3AP46098 478 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 MRPL19P49406 292 aaKnown RBP13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 NUDT6P53370 316 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 OR2B6P58173 313 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 DSCR9P59020 149 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 IRX1P78414 480 aaPredicted RBP13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 SF3A3Q12874 501 aaKnown RBP eCLIP13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 FADDQ13158 208 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 OR7E24Q6IFN5 339 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 UBE2J2Q8N2K1 259 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 CADM2Q8N3J6 435 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 MAL2Q969L2 176 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 ARL5BQ96KC2 179 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 MUS81Q96NY9 551 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 REPIN1Q9BWE0 567 aaKnown RBP13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 CACNG6Q9BXT2 260 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 YAE1D1Q9NRH1 226 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 SLAMF8Q9P0V8 285 aa13.28□□□□□ -0.28
IGHV3-35-201ENST00000390617 IGHV4-30-2A0A087WSY4 118 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 A0A096LNT2 108 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 TMED7-TICAM2A0A0A6YYA0 188 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 CCT8L1PA6NM43 557 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 A8MV72 311 aaPredicted RBP13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 ANGPT2O15123 496 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 MRPL33O75394 65 aaKnown RBP13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 IGHV3-9P01782 118 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 NUDT7P0C024 238 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 TROVE2P10155 538 aaKnown RBP eCLIP13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 CXCR1P25024 350 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 CD40P25942 277 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 NTF4P34130 210 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 POLR2HP52434 150 aaKnown RBP13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 MVDP53602 400 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 H3F3AP84243 136 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 ZNF311Q5JNZ3 666 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 PAGE3Q5JUK9 113 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 GCNT6Q5T4J0 391 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 SLC22A25Q6T423 547 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 ADGRG3Q86Y34 549 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 MUC15Q8N387 334 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 OR10H5Q8NGA6 315 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 OR52N5Q8NH56 324 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 DDIT4LQ96D03 193 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 SIKE1Q9BRV8 207 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 TMEM45AQ9NWC5 275 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 LEF1Q9UJU2 399 aaPredicted RBP13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 POU2F3Q9UKI9 436 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 TRAPPC4Q9Y296 219 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 ZNF443Q9Y2A4 671 aaPredicted RBP13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 IFT52Q9Y366 437 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 NDUFAF1Q9Y375 327 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 TMED7Q9Y3B3 224 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 ARFGEF3Q5TH69 2177 aa13.27□□□□□ -0.29
IGHV3-35-201ENST00000390617 ELOA3DA6NLF2 546 aaPredicted RBP13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 PDLIM1O00151 329 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 PTNP21246 168 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 RPS4Y1P22090 263 aaKnown RBP13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 TACR3P29371 465 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 SLC1A3P43003 542 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 ZNF83P51522 516 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 PLAURQ03405 335 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 SPOCK1Q08629 439 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 EPS8Q12929 822 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 MAPK11Q15759 364 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 GABRA6Q16445 453 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 ZSWIM7Q19AV6 140 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 ELOA3BQ3SY89 546 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 CHRFAM7AQ494W8 412 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 C1QTNF12Q5T7M4 302 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 ZNF544Q6NX49 715 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 CLEC2AQ6UVW9 174 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 ZNF836Q6ZNA1 936 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 FBXL14Q8N1E6 418 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 DEPDC4Q8N2C3 294 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 CLIP4Q8N3C7 705 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 ELOA3Q8NG57 546 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 NFKBIDQ8NI38 313 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 AMBRA1Q9C0C7 1298 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 OR11A1Q9GZK7 315 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 A4GALTQ9NPC4 353 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 SLC25A37Q9NYZ2 338 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 VAPAQ9P0L0 249 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 TMEM181Q9P2C4 612 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 CORO2BQ9UQ03 480 aa13.26□□□□□ -0.29
IGHV3-35-201ENST00000390617 CDHR4A6H8M9 788 aa13.25□□□□□ -0.29
IGHV3-35-201ENST00000390617 H7C417 338 aa13.25□□□□□ -0.29
IGHV3-35-201ENST00000390617 ZNF208O43345 1280 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms