RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ACADVLP49748 655 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 GPC3P51654 580 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 NEK3P51956 506 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 KPNA2P52292 529 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 MAPK12P53778 367 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 DLX1P56177 255 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SRP54P61011 504 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ACTR2P61160 394 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 HAND2P61296 217 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 RND3P61587 244 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 OLR1P78380 273 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 MRPS11P82912 194 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 U2AF1Q01081 240 aaKnown RBP eCLIP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 IRF8Q02556 426 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 RELAQ04206 551 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 GOLGA8DPQ0D2H9 430 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TWF1Q12792 350 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ABRQ12979 859 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 PPFIA1Q13136 1202 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 G3BP1Q13283 466 aaKnown RBP eCLIP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 IFIT5Q13325 482 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 EXOSC2Q13868 293 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CEACAM7Q14002 265 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TRIM14Q14142 442 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 FRG1Q14331 258 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 GINS1Q14691 196 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CCNG2Q16589 344 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 GUCA2BQ16661 112 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CYP51A1Q16850 503 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 KLHL40Q2TBA0 621 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 MAJINQ3KP22 176 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 KRTAP6-2Q3LI66 62 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 LRIT3Q3SXY7 679 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TTLL9Q3SXZ7 439 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TEX44Q53QW1 395 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF542PQ5EBM4 170 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TIMM23BQ5SRD1 257 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 DCAF12Q5T6F0 453 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 FAM27D1Q5T7N8 215 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 LIN9Q5TKA1 542 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CCDC30Q5VVM6 783 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SPATA31B1PQ5VZV4 182 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 KIAA0930Q6ICG6 404 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SULT6B1Q6IMI4 303 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 PRR27Q6MZM9 219 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CDC73Q6P1J9 531 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 PLBD1Q6P4A8 553 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 LRRC8BQ6P9F7 803 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF773Q6PK81 442 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 DEGS2Q6QHC5 323 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 MOXD1Q6UVY6 613 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 C16orf54Q6UWD8 224 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CLEC18BQ6UXF7 455 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 Q6ZRG5 221 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 Q6ZRU5 148 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC16A13Q7RTY0 426 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 GPR142Q7Z601 462 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TSEN54Q7Z6J9 526 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 PIGWQ7Z7B1 504 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 LYG2Q86SG7 212 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 MOB3BQ86TA1 216 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TLK2Q86UE8 772 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 LHFPL3Q86UP9 236 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 LUZP1Q86V48 1076 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 JAZF1Q86VZ6 243 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SERPINA9Q86WD7 417 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TMEM173Q86WV6 379 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 RPS19BP1Q86WX3 136 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ARL17AQ8IVW1 177 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 MSRB3Q8IXL7 192 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 DYNAPQ8N1N2 210 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TMEM256Q8N2U0 113 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 OR2L13Q8N349 312 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ANKRD13CQ8N6S4 541 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 MRPL43Q8N983 215 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 NOXO1Q8NFA2 376 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC26A10Q8NG04 563 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 OR10G3Q8NGC4 313 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 OR2V1Q8NHB1 315 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC26A7Q8TE54 656 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 GRK7Q8WTQ7 553 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ATL1Q8WXF7 558 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 P2RX5Q93086 422 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 GLYATL1Q969I3 302 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 YIPF5Q969M3 257 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 FAM46BQ96A09 425 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 RAD51AP1Q96B01 352 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 DCPSQ96C86 337 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 DNAJC19Q96DA6 116 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 BPIFA2Q96DR5 249 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SPDL1Q96EA4 605 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SAAL1Q96ER3 474 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 C11orf24Q96F05 449 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 OTUB1Q96FW1 271 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 MED8Q96G25 268 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC35G5Q96KT7 338 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 Q96M85 177 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TIGD1Q96MW7 591 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 MBOAT7Q96N66 472 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TGM7Q96PF1 710 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms