RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.63□□□□□ -2.15
TRAV40-201ENST00000390467 GSAPA4D1B5 854 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 FAM47DPA6NHR8 397 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 OR6C65A6NJZ3 312 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 LRRC30A6NM36 301 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 HSBP1L1C9JCN9 74 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 DNALI1O14645 258 aaPredicted RBP1.63□□□□□ -2.15
TRAV40-201ENST00000390467 RASGRF2O14827 1237 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 NVLO15381 856 aaKnown RBP1.63□□□□□ -2.15
TRAV40-201ENST00000390467 YKT6O15498 198 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 AIREO43918 545 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 GMFGO60234 142 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 NIPSNAP2O75323 286 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 MTX2O75431 263 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 STX11O75558 287 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 IDH1O75874 414 aaKnown RBP1.63□□□□□ -2.15
TRAV40-201ENST00000390467 OTCP00480 354 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 AK1P00568 194 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 KRT14P02533 472 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 CSF2P04141 144 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 KRT8P05787 483 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 IVLP07476 585 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 GSTT2P0CG29 244 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 GSTT2BP0CG30 244 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 EPB41P11171 864 aaKnown RBP1.63□□□□□ -2.15
TRAV40-201ENST00000390467 CCDC130P13994 396 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 ETS1P14921 441 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 CPN2P22792 545 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 ATP5A1P25705 553 aaKnown RBP1.63□□□□□ -2.15
TRAV40-201ENST00000390467 AKT2P31751 481 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 BMI1P35226 326 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 CCT6AP40227 531 aaKnown RBP1.63□□□□□ -2.15
TRAV40-201ENST00000390467 TFPI2P48307 235 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 NUMBP49757 651 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 BLVRAP53004 296 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 MAP3K7CLP57077 242 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 B2MP61769 119 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 LIPEQ05469 1076 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 ARFRP1Q13795 201 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 GAMTQ14353 236 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 ARHGAP19Q14CB8 494 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 PSG5Q15238 335 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 RCN1Q15293 331 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 FAM83EQ2M2I3 478 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 TIGITQ495A1 244 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 LRRC23Q53EV4 343 aaPredicted RBP1.63□□□□□ -2.15
TRAV40-201ENST00000390467 SMUG1Q53HV7 270 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 ATAD3BQ5T9A4 648 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 LIN9Q5TKA1 542 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 ZSCAN25Q6NSZ9 544 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 C8orf74Q6P047 294 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 AFTPHQ6ULP2 937 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 EFCAB13Q8IY85 973 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 GCNT2Q8N0V5 402 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 PNKDQ8N490 385 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 RNF10Q8N5U6 811 aaKnown RBP1.63□□□□□ -2.15
TRAV40-201ENST00000390467 ZNF709Q8N972 641 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 ZNF565Q8N9K5 539 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 EIF1ADQ8N9N8 165 aaKnown RBP1.63□□□□□ -2.15
TRAV40-201ENST00000390467 DUSP18Q8NEJ0 188 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 OR10G2Q8NGC3 310 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 OR52E1Q8NGJ3 308 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 OR2T34Q8NGX1 318 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 ERMNQ8TAM6 284 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 IL1F10Q8WWZ1 152 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 STARD8Q92502 1023 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 NT5C3BQ969T7 300 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 TMEM186Q96B77 213 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 EFHD2Q96C19 240 aaPredicted RBP1.63□□□□□ -2.15
TRAV40-201ENST00000390467 LRRC39Q96DD0 335 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 MSANTD3Q96H12 275 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 IFT74Q96LB3 600 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 ZNF578Q96N58 590 aaPredicted RBP1.63□□□□□ -2.15
TRAV40-201ENST00000390467 SECISBP2Q96T21 854 aaKnown RBP1.63□□□□□ -2.15
TRAV40-201ENST00000390467 KLHDC3Q9BQ90 382 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 LLPHQ9BRT6 129 aaKnown RBP1.63□□□□□ -2.15
TRAV40-201ENST00000390467 ZSCAN5AQ9BUG6 496 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 OSBPL10Q9BXB5 764 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 MRPL37Q9BZE1 423 aaKnown RBP1.63□□□□□ -2.15
TRAV40-201ENST00000390467 GPR61Q9BZJ8 451 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 POLR1EQ9GZS1 481 aaKnown RBP1.63□□□□□ -2.15
TRAV40-201ENST00000390467 RAB33BQ9H082 229 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 TPK1Q9H3S4 243 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 RIBC2Q9H4K1 309 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 NGBQ9NPG2 151 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 SDHAF3Q9NRP4 125 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 AGPAT5Q9NUQ2 364 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 RAB20Q9NX57 234 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 TRIM10Q9UDY6 481 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 OPN4Q9UHM6 478 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 ATP6V1HQ9UI12 483 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 PRELID1Q9Y255 219 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 TDRKHQ9Y2W6 561 aaKnown RBP1.63□□□□□ -2.15
TRAV40-201ENST00000390467 COMMD3-BMI1R4GMX3 469 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 U3KQV3 271 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 SPACA6W5XKT8 324 aa1.63□□□□□ -2.15
TRAV40-201ENST00000390467 DOCK9Q9BZ29 2069 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 FAM230AA0A1W2PPH8 454 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 ZNF716A6NP11 495 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 PP2D1A8MPX8 630 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms