RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 KIF20BQ96Q89 1820 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 A0A1W2PRD5 423 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 PRSS37A4D1T9 235 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 LINC01553A4QN01 128 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 ZNF587BE7ETH6 402 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 AIM2O14862 343 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 RGS16O15492 202 aaPredicted RBP5.54□□□□□ -1.52
TRAV35-201ENST00000390462 OR10H3O60404 316 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 GMDSO60547 372 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 FCN3O75636 299 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 BCAR3O75815 825 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 ETHE1O95571 254 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 LATS1O95835 1130 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 IGHG4P01861 327 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 ALDOBP05062 364 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 PNMA6AP0CW24 399 aaPredicted RBP5.54□□□□□ -1.52
TRAV35-201ENST00000390462 IFNA8P32881 189 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 ITGB3BPQ13352 177 aaPredicted RBP5.54□□□□□ -1.52
TRAV35-201ENST00000390462 CYLC2Q14093 348 aaPredicted RBP5.54□□□□□ -1.52
TRAV35-201ENST00000390462 GRB7Q14451 532 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 DMC1Q14565 340 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 BCL2A1Q16548 175 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 TMIGD1Q6UXZ0 262 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 LRRC74BQ6ZQY2 392 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 SLC26A9Q7LBE3 791 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 LRRC6Q86X45 466 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 MARVELD2Q8N4S9 558 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 TMEM199Q8N511 208 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 OR4D9Q8NGE8 314 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.54□□□□□ -1.52
TRAV35-201ENST00000390462 ECHDC3Q96DC8 303 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 CXorf40BQ96DE9 158 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 CNPY3Q9BT09 278 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 CHID1Q9BWS9 393 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 SCML2Q9UQR0 700 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 CUL9Q8IWT3 2517 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 EDC4Q6P2E9 1401 aaKnown RBP5.54□□□□□ -1.52
TRAV35-201ENST00000390462 SMG6Q86US8 1419 aaKnown RBP5.54□□□□□ -1.52
TRAV35-201ENST00000390462 SZT2Q5T011 3432 aa5.54□□□□□ -1.52
TRAV35-201ENST00000390462 IGLV9-49A0A0B4J1Y8 123 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 hCG_38984A0A1B0GV85 526 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 RPS10-NUDT3A0A1W2PQS6 291 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 OTOL1A6NHN0 477 aaPredicted RBP5.53□□□□□ -1.52
TRAV35-201ENST00000390462 SIRPB1O00241 398 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 RFXANKO14593 260 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 TOR1AO14656 332 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 ITGB1BP1O14713 200 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 SYNGR3O43761 229 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 CTSVO60911 334 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 ZNF853P0CG23 659 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 PMCHP20382 165 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 UGT1A4P22310 534 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 ATP5A1P25705 553 aaKnown RBP5.53□□□□□ -1.52
TRAV35-201ENST00000390462 GIFP27352 417 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 RGRP47804 291 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 CX3CR1P49238 355 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 ABCE1P61221 599 aaKnown RBP5.53□□□□□ -1.52
TRAV35-201ENST00000390462 SRSF1Q07955 248 aaKnown RBP eCLIP5.53□□□□□ -1.52
TRAV35-201ENST00000390462 RIPPLY1Q0D2K3 151 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 ISXQ2M1V0 245 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 LSM12Q3MHD2 195 aaKnown RBP5.53□□□□□ -1.52
TRAV35-201ENST00000390462 ODF3L2Q3SX64 289 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 PTPN20Q4JDL3 420 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 MANEAQ5SRI9 462 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 LEKR1Q6ZMV7 388 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 FAM122BQ7Z309 247 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 ABHD12BQ7Z5M8 362 aaPredicted RBP5.53□□□□□ -1.52
TRAV35-201ENST00000390462 MTERF4Q7Z6M4 381 aaKnown RBP5.53□□□□□ -1.52
TRAV35-201ENST00000390462 OR4N5Q8IXE1 308 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 JAGN1Q8N5M9 183 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 CYB561A3Q8NBI2 242 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 SEMA6DQ8NFY4 1073 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 CDC26Q8NHZ8 85 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 GTF2H4Q92759 462 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 ZNF641Q96N77 438 aaPredicted RBP5.53□□□□□ -1.52
TRAV35-201ENST00000390462 XPO6Q96QU8 1125 aaKnown RBP5.53□□□□□ -1.52
TRAV35-201ENST00000390462 SPZ1Q9BXG8 430 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 SEMA4CQ9C0C4 833 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 GBA3Q9H227 469 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 ADNPQ9H2P0 1102 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 Q9HAA7 133 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 PRSS16Q9NQE7 514 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 ZC4H2Q9NQZ6 224 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 CUTCQ9NTM9 273 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 TEX10Q9NXF1 929 aaPredicted RBP5.53□□□□□ -1.52
TRAV35-201ENST00000390462 CLEC5AQ9NY25 188 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 ZNHIT2Q9UHR6 403 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 RALYQ9UKM9 306 aaKnown RBP5.53□□□□□ -1.52
TRAV35-201ENST00000390462 PDE10AQ9Y233 779 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 OARD1Q9Y530 152 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 PTGDR2Q9Y5Y4 395 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 RTL1A6NKG5 1358 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 CARMIL3Q8ND23 1372 aa5.53□□□□□ -1.52
TRAV35-201ENST00000390462 GRIN2DO15399 1336 aa5.52□□□□□ -1.53
TRAV35-201ENST00000390462 USP42Q9H9J4 1324 aaKnown RBP5.52□□□□□ -1.53
TRAV35-201ENST00000390462 TRBV9A0A0B4J1U6 114 aa5.52□□□□□ -1.53
TRAV35-201ENST00000390462 A0A1W2PQ72 361 aa5.52□□□□□ -1.53
TRAV35-201ENST00000390462 INAFM1C9JVW0 142 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms