RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 ZMYM6O95789 1325 aa-0.73□□□□□ -2.53
SNORA40-201ENST00000388090 MUC21A0A0G2JKD1 596 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 MUC21A0A140T8X8 626 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 ARHGEF35A5YM69 484 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 H3BMQ9 156 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 KIF2AO00139 706 aaPredicted RBP-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 ALOX15BO15296 676 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 ZNF73O43830 326 aaPredicted RBP-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 SLC25A14O95258 325 aaPredicted RBP-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 GNA14O95837 355 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 APCSP02743 223 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 APLNRP35414 380 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 FGF8P55075 233 aaPredicted RBP-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 IL1RL1Q01638 556 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 PPIL2Q13356 520 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 PTK6Q13882 451 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 HES5Q5TA89 166 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 Q6ZRN7 208 aaPredicted RBP-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 BNIPLQ7Z465 357 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 WDR36Q8NI36 951 aaKnown RBP-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 AMDHD1Q96NU7 426 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 OR5B2Q96R09 309 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 CCT7Q99832 543 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 ECSITQ9BQ95 431 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 NAT9Q9BTE0 207 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 NDUFAF3Q9BU61 184 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 CAPS2Q9BXY5 557 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 POLD4Q9HCU8 107 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 QPCTLQ9NXS2 382 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 TAS2R1Q9NYW7 299 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 TRAF3IP3Q9Y228 551 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 RAD54L2Q9Y4B4 1467 aa-0.74□□□□□ -2.53
SNORA40-201ENST00000388090 DMBT1Q9UGM3 2413 aaPredicted RBP-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 OR6C70A6NIJ9 312 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 TAPBPO15533 448 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 TTI1O43156 1089 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 BCAS1O75363 584 aaPredicted RBP-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 GCM2O75603 506 aaPredicted RBP-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 RP2O75695 350 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 ASGR1P07306 291 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 PFN1P07737 140 aaKnown RBP-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 PDHBP11177 359 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 LAGE3Q14657 143 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 ZSWIM7Q19AV6 140 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 COA6Q5JTJ3 125 aaKnown RBP-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 GPRC6AQ5T6X5 926 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 TIGD3Q6B0B8 471 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 PRMT9Q6P2P2 845 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 CBLN3Q6UW01 205 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 CES3Q6UWW8 571 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 ZNF571Q7Z3V5 609 aaPredicted RBP-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 P4HA3Q7Z4N8 544 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 GOLGA7Q7Z5G4 137 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 CCDC83Q8IWF9 413 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 LINC01561Q8N1V8 128 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 Q8NFD4 153 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 LILRB4Q8NHJ6 448 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 CORO2AQ92828 525 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 SKA1Q96BD8 255 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 RHOXF2Q9BQY4 288 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 NFKBIZQ9BYH8 718 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 RAB34Q9BZG1 259 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 TSPYL1Q9H0U9 437 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 RABEP2Q9H5N1 569 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 GPN2Q9H9Y4 310 aaPredicted RBP-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 UTP6Q9NYH9 597 aaKnown RBP-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 ADGRA3Q8IWK6 1321 aa-0.75□□□□□ -2.53
SNORA40-201ENST00000388090 A0A0U1RQV1 116 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 ARHGEF37A1IGU5 675 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 OOEPA6NGQ2 149 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 BTNL10A8MVZ5 291 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 HAS3O00219 553 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 SYNGR4O95473 234 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 BCHEP06276 602 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 POU2F1P14859 743 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 H2AFXP16104 143 aaPredicted RBP-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 CD80P33681 288 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 SERPINB6P35237 376 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 CCL11P51671 97 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 HERVK_113P63132 956 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 ERVK-8P63133 956 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 SLC7A9P82251 487 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 IFT88Q13099 833 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 SMUG1Q53HV7 270 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 AP1ARQ63HQ0 302 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 LCN12Q6JVE5 192 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 TRAT1Q6PIZ9 186 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 KLHL7Q8IXQ5 586 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 RNASE11Q8TAA1 199 aaKnown RBP-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 ST8SIA1Q92185 356 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 IP6K3Q96PC2 410 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 SMR3AQ99954 134 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 ERVK-6Q9BXR3 956 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 ZNF385DQ9H6B1 395 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 PFDN4Q9NQP4 134 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 SH3TC1Q8TE82 1336 aa-0.76□□□□□ -2.53
SNORA40-201ENST00000388090 DOCK6Q96HP0 2047 aa-0.77□□□□□ -2.53
SNORA40-201ENST00000388090 C5orf51A6NDU8 294 aa-0.77□□□□□ -2.53
SNORA40-201ENST00000388090 OR6C65A6NJZ3 312 aa-0.77□□□□□ -2.53
SNORA40-201ENST00000388090 BPY2O14599 106 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms