RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 LAGE3Q14657 143 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 SNRNP35Q16560 246 aaKnown RBP0.04□□□□□ -2.4
SNORD28-201ENST00000384706 SGCAQ16586 387 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 TIGITQ495A1 244 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 DEFB134Q4QY38 66 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 COA6Q5JTJ3 125 aaKnown RBP0.04□□□□□ -2.4
SNORD28-201ENST00000384706 FAM78AQ5JUQ0 283 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 HECTD3Q5T447 861 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 HES5Q5TA89 166 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 PRAMEF7Q5VXH5 474 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 ZFP1Q6P2D0 407 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 HSDL2Q6YN16 418 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 KDM7AQ6ZMT4 941 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 Q6ZN92 141 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 TMEM136Q6ZRR5 245 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 FAM47EQ6ZV65 393 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 PAQR9Q6ZVX9 377 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 KCTD9Q7L273 389 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 GET4Q7L5D6 327 aaPredicted RBP0.04□□□□□ -2.4
SNORD28-201ENST00000384706 LPCAT2Q7L5N7 544 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 GLRX5Q86SX6 157 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 THOC6Q86W42 341 aaKnown RBP0.04□□□□□ -2.4
SNORD28-201ENST00000384706 TMEM25Q86YD3 366 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 THNSL1Q8IYQ7 743 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF683Q8IZ20 524 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 RDH10Q8IZV5 341 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 LINC01561Q8N1V8 128 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 SVOPLQ8N434 492 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 LSMEM1Q8N8F7 131 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 STKLD1Q8NE28 680 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 FBXL13Q8NEE6 735 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 OR10G4Q8NGN3 311 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 OR5M1Q8NGP8 315 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 OR13G1Q8NGZ3 307 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 OR2G3Q8NGZ4 309 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 TCTEX1D2Q8WW35 142 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 RPL3LQ92901 407 aaKnown RBP0.04□□□□□ -2.4
SNORD28-201ENST00000384706 FGF11Q92914 225 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF560Q96MR9 790 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 AMDHD1Q96NU7 426 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF317Q96PQ6 595 aaPredicted RBP0.04□□□□□ -2.4
SNORD28-201ENST00000384706 CAMK2N2Q96S95 79 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 ECSITQ9BQ95 431 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 FRMD8P1Q9BZ68 369 aaPredicted RBP0.04□□□□□ -2.4
SNORD28-201ENST00000384706 OSBPL8Q9BZF1 889 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 NAT10Q9H0A0 1025 aaKnown RBP0.04□□□□□ -2.4
SNORD28-201ENST00000384706 C20orf85Q9H1P6 137 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 RPP21Q9H633 154 aaKnown RBP0.04□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF385DQ9H6B1 395 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 SUDS3Q9H7L9 328 aaPredicted RBP0.04□□□□□ -2.4
SNORD28-201ENST00000384706 COPS7BQ9H9Q2 264 aaPredicted RBP0.04□□□□□ -2.4
SNORD28-201ENST00000384706 FOLH1BQ9HBA9 442 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 TRPV5Q9NQA5 729 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 QPCTLQ9NXS2 382 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 CLCF1Q9UBD9 225 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 DNAJB9Q9UBS3 223 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 CFDP1Q9UEE9 299 aaPredicted RBP0.04□□□□□ -2.4
SNORD28-201ENST00000384706 BCAP29Q9UHQ4 241 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 MAD2L2Q9UI95 211 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 CD84Q9UIB8 345 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF639Q9UID6 485 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 FBXW2Q9UKT8 454 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 STX8Q9UNK0 236 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 COL6A6A6NMZ7 2263 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 TRIP11Q15643 1979 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 SH3TC1Q8TE82 1336 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 CENPJQ9HC77 1338 aaPredicted RBP0.04□□□□□ -2.4
SNORD28-201ENST00000384706 ATP10DQ9P241 1426 aa0.04□□□□□ -2.4
SNORD28-201ENST00000384706 TICRRQ7Z2Z1 1910 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 VWDEQ8N2E2 1590 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 IGHV3OR16-8A0A075B7F1 116 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 A0A0U1RQG5 324 aaPredicted RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF320A2RRD8 509 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 SDHAF1A6NFY7 115 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 VSTM2BA6NLU5 285 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 C12orf71A8MTZ7 269 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 PHGR1C9JFL3 82 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 H3BNH8 94 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 HIP1O00291 1037 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 DCTN6O00399 190 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 TAPBPO15533 448 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 PRKYO43930 277 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 SH3BP5O60239 455 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 CCDC22O60826 627 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 DKC1O60832 514 aaKnown RBP eCLIP0.03□□□□□ -2.42e-36■■□□□ 13.2
SNORD28-201ENST00000384706 TBCAO75347 108 aaKnown RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 BCAS1O75363 584 aaPredicted RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 UGT2B17O75795 530 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 GABARAPO95166 117 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 HLA-DQA1P01909 254 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 BGLAPP02818 100 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 ALDOBP05062 364 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 KLK3P07288 261 aaPredicted RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 UQCRFS1P1P0C7P4 283 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 IGHV1-8P0DP01 117 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 UROSP10746 265 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 POU2F1P14859 743 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 UQCRBP14927 111 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF250P15622 560 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 CD80P33681 288 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms