RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 DUXBA0A1W2PPF3 345 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 OR2T7P0C7T2 308 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 HOXC13P31276 330 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 LSM3P62310 102 aaKnown RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 MC1RQ01726 317 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 DECR1Q16698 335 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 MPEG1Q2M385 716 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 AFMIDQ63HM1 303 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 C22orf39Q6P5X5 142 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 NRARPQ7Z6K4 114 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 PQLC3Q8N755 202 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 OR13C2Q8NGS9 318 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 OR2T27Q8NH04 317 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 KCNJ15Q99712 375 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 ORAI3Q9BRQ5 295 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 RBCK1Q9BYM8 510 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 HIPK2Q9H2X6 1198 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF586Q9NXT0 402 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 PRODH2Q9UF12 536 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 RFXAPO00287 272 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 KCNK5O95279 499 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 GAPDHP04406 335 aaKnown RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 ERVS71-1P61550 626 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 TAF9Q16594 264 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 LRRC73Q5JTD7 316 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF366Q8N895 744 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 CD300LFQ8TDQ1 290 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 DPF1Q92782 380 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 BPIFA2Q96DR5 249 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 SDSLQ96GA7 329 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 TMEM204Q9BSN7 226 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 SEMA6CQ9H3T2 930 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 FZD8Q9H461 694 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 SEC61A2Q9H9S3 476 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 GDE1Q9NZC3 331 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 APOBEC3BQ9UH17 382 aaKnown RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 MAP4K5Q9Y4K4 846 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 MYBPHLA2RUH7 354 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 C17orf112F2Z3M2 114 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 M0R3H8 397 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 ENPP3O14638 875 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 CDC123O75794 336 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 LRATO95237 230 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 GPX2P18283 190 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 CD1CP29017 333 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 RAB28P51157 221 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 SNTB1Q13884 538 aaKnown RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 C4orf17Q53FE4 359 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 USP53Q70EK8 1073 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 NAA40Q86UY6 237 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 BORCS8Q96FH0 119 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 ACY3Q96HD9 319 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 PTPN18Q99952 460 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 LMF2Q9BU23 707 aaKnown RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 C1QTNF2Q9BXJ5 285 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 ZNF576Q9H609 170 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 TMEM100Q9NV29 134 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 PURGQ9UJV8 347 aaKnown RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 BACE2Q9Y5Z0 518 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 AUP1Q9Y679 476 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 SERPINE2P07093 398 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 EEF1A1P68104 462 aaKnown RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 CXADRP78310 365 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 EEF1A1P5Q5VTE0 462 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 Q6ZVU0 165 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 SSX6Q7RTT6 188 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 FAM71E2Q8N5Q1 922 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 OR4K1Q8NGD4 311 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 PIWIL1Q96J94 861 aaKnown RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 DGAT2Q96PD7 388 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 SLIRPQ9GZT3 109 aaKnown RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 LOC390937A0A1W2PQ73 354 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 B4DXG7 233 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 PIP5K1CO60331 668 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 CSTBP04080 98 aaKnown RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 CHRM2P08172 466 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 FOLR2P14207 255 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 ELK4P28324 431 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 CHRNB4P30926 498 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 GABRA2P47869 451 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 BIDP55957 195 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 DSC2Q02487 901 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 LTB4RQ15722 352 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 CAMKMTQ7Z624 323 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 RIMKLAQ8IXN7 391 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 NETO1Q8TDF5 533 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 DVL3Q92997 716 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 PINX1Q96BK5 328 aaKnown RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 PRR11Q96HE9 360 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 MSLNLQ96KJ4 702 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 MS4A4EQ96PG1 132 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 KCNC2Q96PR1 638 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 SLC5A7Q9GZV3 580 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 ATG10Q9H0Y0 220 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 RIMS4Q9H426 269 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-203ENST00000381196 FAM74A7A6NL05 159 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 CYR61O00622 381 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 TSPAN6O43657 245 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 PIGAP37287 484 aa4.56□□□□□ -1.68
PTPRD-203ENST00000381196 OPRD1P41143 372 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms