RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 FAM46CQ5VWP2 391 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 RAB12Q6IQ22 244 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 LIN54Q6MZP7 749 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 GLDNQ6ZMI3 551 aaPredicted RBP12.76□□□□□ -0.37
SDC1-202ENST00000381150 THSD4Q6ZMP0 1018 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 CDK20Q8IZL9 346 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 BRIX1Q8TDN6 353 aaKnown RBP12.76□□□□□ -0.37
SDC1-202ENST00000381150 CXorf40AQ8TE69 158 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 CA5BQ9Y2D0 317 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 SCN2AQ99250 2005 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 A0A1W2PPV9 198 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 IGLON5A6NGN9 336 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 UNC119BA6NIH7 251 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 SGCEO43556 437 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 IGHA1P01876 353 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 GIPP09681 153 aaPredicted RBP12.76□□□□□ -0.37
SDC1-202ENST00000381150 IFNGR1P15260 489 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 MPIP34949 423 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 PDX1P52945 283 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 CDK3Q00526 305 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 FZD5Q13467 585 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 KCNAB1Q14722 419 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 PUS10Q3MIT2 529 aaKnown RBP12.76□□□□□ -0.37
SDC1-202ENST00000381150 SEZ6L2Q6UXD5 910 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 ZNF546Q86UE3 836 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 TPRA1Q86W33 373 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 DCUN1D3Q8IWE4 304 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 NUP43Q8NFH3 380 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 OR5K2Q8NHB8 316 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 RAB7BQ96AH8 199 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 DNAJA3Q96EY1 480 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 ZNF75AQ96N20 296 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 OR7D2Q96RA2 312 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 ZNF649Q9BS31 505 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 C6orf106Q9H6K1 298 aaPredicted RBP12.76□□□□□ -0.37
SDC1-202ENST00000381150 TRPV4Q9HBA0 871 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 LHX9Q9NQ69 397 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 IL20Q9NYY1 176 aa12.76□□□□□ -0.37
SDC1-202ENST00000381150 AKAP7Q9P0M2 348 aaPredicted RBP12.76□□□□□ -0.37
SDC1-202ENST00000381150 MYEF2Q9P2K5 600 aaKnown RBP12.76□□□□□ -0.37
SDC1-202ENST00000381150 A0A1B0GW55 424 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 GRXCR1A8MXD5 290 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 PRSS44E7EML9 344 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 PRAMEF2O60811 474 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 DUX4L2P0CJ85 424 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 DUX4L3P0CJ86 424 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 DUX4L4P0CJ87 422 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 DUX4L5P0CJ88 424 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 DUX4L6P0CJ89 424 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 DUX4L7P0CJ90 424 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 TMIGD3P0DMS9 266 aaPredicted RBP12.75□□□□□ -0.37
SDC1-202ENST00000381150 BSGP35613 385 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 RPS15P62841 145 aaKnown RBP12.75□□□□□ -0.37
SDC1-202ENST00000381150 UBE2IP63279 158 aaKnown RBP12.75□□□□□ -0.37
SDC1-202ENST00000381150 FGL1Q08830 312 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 FUT5Q11128 374 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 C2orf27AQ580R0 203 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 FAM109BQ6ICB4 259 aaPredicted RBP12.75□□□□□ -0.37
SDC1-202ENST00000381150 TANGO2Q6ICL3 276 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 OR7E24Q6IFN5 339 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 CD300LDQ6UXZ3 194 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 SLC16A13Q7RTY0 426 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 OR52E2Q8NGJ4 325 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 RGMAQ96B86 450 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 WBP1Q96G27 269 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 KLHL31Q9H511 634 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 DUX4Q9UBX2 424 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 HEATR5BQ9P2D3 2071 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 TBC1D3BA6NDS4 549 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 CCSO14618 274 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 LCMT2O60294 686 aaKnown RBP12.75□□□□□ -0.37
SDC1-202ENST00000381150 FGF2P09038 288 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 SBK2P0C263 348 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 MAOBP27338 520 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 DLX5P56178 289 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 DUSP2Q05923 314 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 SERTAD2Q14140 314 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 ARHGAP19Q14CB8 494 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 TMEM44Q2T9K0 475 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 ZNF660Q6AZW8 331 aaPredicted RBP12.75□□□□□ -0.37
SDC1-202ENST00000381150 UNQ6126/PRO20091Q6UXV3 157 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 SLC16A11Q8NCK7 471 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 SUSD6Q92537 303 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 C3orf49Q96BT1 292 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 SIDT1Q9NXL6 827 aaKnown RBP12.75□□□□□ -0.37
SDC1-202ENST00000381150 ZMIZ1Q9ULJ6 1067 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 MYO9BQ13459 2157 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 ZNF705EA8MWA4 302 aaPredicted RBP12.75□□□□□ -0.37
SDC1-202ENST00000381150 RAD1O60671 282 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 PRAF2O60831 178 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 GTF2F2P13984 249 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 HOXB3P14651 431 aaPredicted RBP12.75□□□□□ -0.37
SDC1-202ENST00000381150 RPL4P36578 427 aaKnown RBP12.75□□□□□ -0.37
SDC1-202ENST00000381150 AGBL4Q5VU57 503 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 OTPQ5XKR4 325 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 VITQ6UXI7 678 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 TMPRSS12Q86WS5 348 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 CDH26Q8IXH8 852 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 FGF11Q92914 225 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 PINK1Q9BXM7 581 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms